Evidence map›Paper›PMID 25682868›Full record

ArticleOncotarget2015

Non-coding genomic regions possessing enhancer and silencer potential are associated with healthy aging and exceptional survival.

Sangkyu Kim, David A Welsh, Leann Myers, Katie E Cherry, Jennifer Wyckoff, S Michal Jazwinski

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.2field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
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  4. Feature Selection Algorithms Enhance the Accuracy of Frailty Indexes as Measures of Biological Age.The journals of gerontology. Series A, Biological sciences and medical sciences · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Sangkyu KimTulane Center for Aging and Department of Medicine, Tulane University Health Sciences Center, New Orleans, LA 70112, USA.
David A WelshDepartment of Medicine, Louisiana State University Health Sciences Center, New Orleans, LA 70112, USA.
Leann MyersDepartment of Biostatistics and Bioinformatics, School of Public Health and Tropical Medicine, Tulane University Health Sciences Center, New Orleans, LA 70112, USA.
Katie E CherryDepartment of Psychology, Louisiana State University, Baton Rouge, LA 70803, USA.
Jennifer WyckoffTulane Center for Aging and Department of Medicine, Tulane University Health Sciences Center, New Orleans, LA 70112, USA.
S Michal JazwinskiTulane Center for Aging and Department of Medicine, Tulane University Health Sciences Center, New Orleans, LA 70112, USA.
Tulane University · USLouisiana State University · USLouisiana State University Health Sciences Center New Orleans · US

Funding

The role of the CMV-associated reactive oxygen species in age-relatedP20GM103629 · NIGMS · TULANE UNIVERSITY OF LOUISIANA · PI JAZWINSKI, S MICHAL · 2012 to 2021
$22.4M
VASCULAR STATUS, PHYSICAL FUNCTION, AND HEALTHY AGINGP01AG022064 · NIA · TULANE UNIVERSITY OF LOUISIANA · PI JAZWINSKI, S MICHAL · 2004 to 2010
$9.6M
Genetics of Longevity in Long-Lived SiblingsK01AG027905 · NIA · TULANE UNIVERSITY OF LOUISIANA · PI KIM, SANGKYU · 2007 to 2010
$421k
NIA NIH HHS K01 AG027905NIA NIH HHS K01AG027905NIA NIH HHS P01 AG022064NIA NIH HHS P01AG022064NIGMS NIH HHS P20 GM103629NIGMS NIH HHS P20GM103629
6 · The paper itself

Abstract

We have completed a genome-wide linkage scan for healthy aging using data collected from a family study, followed by fine-mapping by association in a separate population, the first such attempt reported. The family cohort consisted of parents of age 90 or above and their children ranging in age from 50 to 80. As a quantitative measure of healthy aging, we used a frailty index, called FI34, based on 34 health and function variables. The linkage scan found a single significant linkage peak on chromosome 12. Using an independent cohort of unrelated nonagenarians, we carried out a fine-scale association mapping of the region suggestive of linkage and identified three sites associated with healthy aging. These healthy-aging sites (HASs) are located in intergenic regions at 12q13-14. HAS-1 has been previously associated with multiple diseases, and an enhancer was recently mapped and experimentally validated within the site. HAS-2 is a previously uncharacterized site possessing genomic features suggestive of enhancer activity. HAS-3 contains features associated with Polycomb repression. The HASs also contain variants associated with exceptional longevity, based on a separate analysis. Our results provide insight into functional genomic networks involving non-coding regulatory elements that are involved in healthy aging and longevity.

Indexed as

AgedAged, 80 and overAgingChromosomes, Human, Pair 12Family HealthFemaleGenetic Predisposition to DiseaseGenome-Wide Association StudyHumansLongevityMaleMiddle AgedPolymorphism, Single Nucleotide

Identifiers

PMID25682868
PMCPMC4414140
OpenAlexW2152104540

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.