Evidence map›Paper›PMID 25681525›Full record

ArticleJournal of virological methods2015

Prospective comparison of RT-PCR/ESI-MS to Prodesse ProFlu Plus and Cepheid GenXpert for the detection of Influenza A and B viruses.

Justin Hardick, Andrea Dugas, Joshua Goheen, Richard Rothman, Charlotte Gaydos

Abstract readComparative StudyEvaluation Study
In one paragraph

Article in Journal of virological methods, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Performance evaluation of the Panther Fusion® respiratory tract panel.Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Justin HardickJohns Hopkins University School of Medicine, Division of Infectious Diseases, United States. Electronic address: Jhardic1@jhmi.edu.
Andrea DugasJohns Hopkins University School of Medicine, Department of Emergency Medicine, United States.
Joshua GoheenJohns Hopkins University School of Medicine, Division of Infectious Diseases, United States.
Richard RothmanJohns Hopkins University School of Medicine, Department of Emergency Medicine, United States.
Charlotte GaydosJohns Hopkins University School of Medicine, Division of Infectious Diseases, United States.

Funding

The Illumina iScan SystemS10RR027016 · NCRR · JOHNS HOPKINS UNIVERSITY · PI BARNES, KATHLEEN C · 2010 to 2010
$209k
NCRR NIH HHS S10RR027016NIAID NIH HHS HHSN272201400007C
6 · The paper itself

Abstract

RT-PCR/ESI-MS has previously demonstrated the capability to detect and identify respiratory viral pathogens in nasopharyngeal swabs. This study expands on previous research by performing a prospective evaluation of RT-PCR/ESI-MS to detect and identify Influenza A and B viruses compared to Prodesse ProFlu Plus and combined ProFlu Plus and Cepheid Xpert Flu. ProFlu Plus was also used as a gold standard for comparison for respiratory syncytial virus detection. Using ProFlu Plus as a gold standard, RT-PCR/ESI-MS had sensitivity and specificity of 82.1% (23/28) and 100% (258/258), respectively, for Influenza A, 100% (16/16) and 99.6% (269/270), respectively for Influenza B, and 88.6% (39/44) and 99.6% (241/242) for any Influenza virus. Using matching results from ProFlu Plus and Xpert Flu as a gold standard, RT-PCR/ESI-MS had 85.2% (23/27) and 100% (259/259) sensitivity and specificity respectively for Influenza A, 100% (14/14) and 99.6% (270/272), respectively for Influenza B virus. Overall, RT-PCR/ESI-MS was not as sensitive as the combined gold standard of ProFlu Plus and Xpert Flu, although it has the capability of detecting other respiratory viruses.

Indexed as

AdolescentAdultAgedAged, 80 and overFemaleHumansInfluenza A virusInfluenza B virusInfluenza, HumanMaleMiddle AgedProspective StudiesReverse Transcriptase Polymerase Chain ReactionSensitivity and SpecificitySpectrometry, Mass, Electrospray IonizationYoung AdultInfluenza virusMolecular diagnosticsRespiratory virusesRT-PCR/ESI-MS

Identifiers

PMID25681525
PMCPMC4560249

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.