Evidence map›Paper›PMID 25681330›Full record

ArticlePlant physiology2015

The role of the plant-specific ALTERED XYLOGLUCAN9 protein in Arabidopsis cell wall polysaccharide O-acetylation.

Alex Schultink, Dan Naylor, Murali Dama, Markus Pauly

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
18.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 122 citations in OpenAlex.

  1. Article
  2. Synthesis of Plant-InspiredACS synthetic biology · 2026
    Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Plant Cell Wall PolysaccharidePlants (Basel, Switzerland) · 2024
    Review
  8. ACS omega · 2024
    Article
  9. Article
  10. Article
  11. Article
  12. Insights into pectinCell surface (Amsterdam, Netherlands) · 2023
    Review
  13. Article
  14. Article
  15. Defense Mechanisms of CottonInternational journal of molecular sciences · 2022
    Review
  16. Article
  17. Article
  18. Identification and fine-mapping of a major QTL (Frontiers in plant science · 2022
    Article
  19. Review
  20. International journal of molecular sciences · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Alex SchultinkDepartment of Plant and Microbial Biology (A.S., D.N., M.P.) and Energy Biosciences Institute (M.D., M.P.), University of California, Berkeley, California 94720.
Dan NaylorDepartment of Plant and Microbial Biology (A.S., D.N., M.P.) and Energy Biosciences Institute (M.D., M.P.), University of California, Berkeley, California 94720.
Murali DamaDepartment of Plant and Microbial Biology (A.S., D.N., M.P.) and Energy Biosciences Institute (M.D., M.P.), University of California, Berkeley, California 94720.
Markus PaulyDepartment of Plant and Microbial Biology (A.S., D.N., M.P.) and Energy Biosciences Institute (M.D., M.P.), University of California, Berkeley, California 94720 mpauly69@berkeley.edu.
University of California, Berkeley · USEnergy Biosciences Institute · US

Funding

POSTGRADUATE TRAINING PROGRAM IN GENETICST32GM007127 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI DILLIN, ANDREW G · 1985 to 2016
$7.9M
NIGMS NIH HHS GM007127NIGMS NIH HHS T32 GM007127
6 · The paper itself

Abstract

A mutation in the ALTERED XYLOGLUCAN9 (AXY9) gene was found to be causative for the decreased xyloglucan acetylation phenotype of the axy9.1 mutant, which was identified in a forward genetic screen for Arabidopsis (Arabidopsis thaliana) mutants. The axy9.1 mutant also exhibits decreased O-acetylation of xylan, implying that the AXY9 protein has a broad role in polysaccharide acetylation. An axy9 insertional mutant exhibits severe growth defects and collapsed xylem, demonstrating the importance of wall polysaccharide O-acetylation for normal plant growth and development. Localization and topological experiments indicate that the active site of the AXY9 protein resides within the Golgi lumen. The AXY9 protein appears to be a component of the plant cell wall polysaccharide acetylation pathway, which also includes the REDUCED WALL ACETYLATION and TRICHOME BIREFRINGENCE-LIKE proteins. The AXY9 protein is distinct from the TRICHOME BIREFRINGENCE-LIKE proteins, reported to be polysaccharide acetyltransferases, but does share homology with them and other acetyltransferases, suggesting that the AXY9 protein may act to produce an acetylated intermediate that is part of the O-acetylation pathway.

Indexed as

Gene Expression Regulation, PlantAcetylationAcetyltransferasesArabidopsisArabidopsis ProteinsCell WallChromosome MappingGenes, ReporterGenotypeGlucansGolgi ApparatusModels, BiologicalMutagenesis, InsertionalPhenotypePhylogenyPlant StemsAcetyltransferasesArabidopsis ProteinsAXY9 protein, ArabidopsisGlucansPolysaccharidesXylansxyloglucan

Identifiers

PMID25681330
PMCPMC4378174
OpenAlexW1990585410

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.