Evidence map›Paper›PMID 25681329›Full record

ArticlePlant physiology2015

Arabidopsis glutamate receptor homolog3.5 modulates cytosolic Ca2+ level to counteract effect of abscisic acid in seed germination.

Dongdong Kong, Chuanli Ju, Aisha Parihar, So Kim, Daeshik Cho, June M Kwak

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed
15.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed, 148 citations in OpenAlex.

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  18. Functional characterization and allelic mining ofFrontiers in plant science · 2023
    Article
  19. Article
  20. MiningFrontiers in plant science · 2023
    Article

8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Dongdong KongDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, Maryland 20742 (D.K., C.J., A.P., S.K., D.C.); andCenter for Plant Aging Research, Institute for Basic Science, Department of New Biology, Daegu Gyeongbuk Institute of Science and Technology, Daegu 711-873, Republic of Korea (J.M.K.) ddkong169@163.com jkwak@dgist.ac.kr.
Chuanli JuDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, Maryland 20742 (D.K., C.J., A.P., S.K., D.C.); andCenter for Plant Aging Research, Institute for Basic Science, Department of New Biology, Daegu Gyeongbuk Institute of Science and Technology, Daegu 711-873, Republic of Korea (J.M.K.).
Aisha PariharDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, Maryland 20742 (D.K., C.J., A.P., S.K., D.C.); andCenter for Plant Aging Research, Institute for Basic Science, Department of New Biology, Daegu Gyeongbuk Institute of Science and Technology, Daegu 711-873, Republic of Korea (J.M.K.).
So KimDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, Maryland 20742 (D.K., C.J., A.P., S.K., D.C.); andCenter for Plant Aging Research, Institute for Basic Science, Department of New Biology, Daegu Gyeongbuk Institute of Science and Technology, Daegu 711-873, Republic of Korea (J.M.K.).
Daeshik ChoDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, Maryland 20742 (D.K., C.J., A.P., S.K., D.C.); andCenter for Plant Aging Research, Institute for Basic Science, Department of New Biology, Daegu Gyeongbuk Institute of Science and Technology, Daegu 711-873, Republic of Korea (J.M.K.).
June M KwakDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, Maryland 20742 (D.K., C.J., A.P., S.K., D.C.); andCenter for Plant Aging Research, Institute for Basic Science, Department of New Biology, Daegu Gyeongbuk Institute of Science and Technology, Daegu 711-873, Republic of Korea (J.M.K.) ddkong169@163.com jkwak@dgist.ac.kr.
University of Maryland, College Park · USDaegu Gyeongbuk Institute of Science and Technology · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Seed germination is a critical step in a plant's life cycle that allows successful propagation and is therefore strictly controlled by endogenous and environmental signals. However, the molecular mechanisms underlying germination control remain elusive. Here, we report that the Arabidopsis (Arabidopsis thaliana) glutamate receptor homolog3.5 (AtGLR3.5) is predominantly expressed in germinating seeds and increases cytosolic Ca2+ concentration that counteracts the effect of abscisic acid (ABA) to promote germination. Repression of AtGLR3.5 impairs cytosolic Ca2+ concentration elevation, significantly delays germination, and enhances ABA sensitivity in seeds, whereas overexpression of AtGLR3.5 results in earlier germination and reduced seed sensitivity to ABA. Furthermore, we show that Ca2+ suppresses the expression of ABSCISIC ACID INSENSITIVE4 (ABI4), a key transcription factor involved in ABA response in seeds, and that ABI4 plays a fundamental role in modulation of Ca2+-dependent germination. Taken together, our results provide molecular genetic evidence that AtGLR3.5-mediated Ca2+ influx stimulates seed germination by antagonizing the inhibitory effects of ABA through suppression of ABI4. These findings establish, to our knowledge, a new and pivotal role of the plant glutamate receptor homolog and Ca2+ signaling in germination control and uncover the orchestrated modulation of the AtGLR3.5-mediated Ca2+ signal and ABA signaling via ABI4 to fine-tune the crucial developmental process, germination, in Arabidopsis.

Indexed as

Gene Expression Regulation, PlantAbscisic AcidArabidopsisArabidopsis ProteinsCalciumCytosolGenes, ReporterGerminationModels, BiologicalMutationPlant Growth RegulatorsReceptors, GlutamateSeedsSignal TransductionTranscription FactorsAbscisic AcidArabidopsis ProteinsCalciumglutamate receptor 3.5, ArabidopsisPlant Growth RegulatorsReceptors, GlutamateTranscription Factors

Identifiers

PMID25681329
PMCPMC4378146
OpenAlexW2156401995

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.