Evidence map›Paper›PMID 25681156›Full record

ArticleThe Plant cell2015

Retromer contributes to immunity-associated cell death in Arabidopsis.

David Munch, Ooi-Kock Teh, Frederikke Gro Malinovsky, Qinsong Liu, Ramesh R Vetukuri, Farid El Kasmi, Peter Brodersen, Ikuko Hara-Nishimura, Jeffery L Dangl, Morten Petersen and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
17.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 77 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Cargo Sorting Zones in Plant Trans-Golgi Network.Sub-cellular biochemistry · 2026
    Review
  5. Article
  6. Article
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  20. The retromer is co-opted to deliver lipid enzymes for the biogenesis of lipid-enriched tombusviral replication organelles.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 4 countries.

David MunchDepartment of Biology, Copenhagen University, Copenhagen 2200, Denmark.
Ooi-Kock TehDepartment of Plant Biology, Uppsala BioCenter, Swedish University of Agricultural Sciences and Linnean Center of Plant Biology, SE-75007 Uppsala, Sweden.
Frederikke Gro MalinovskyDepartment of Biology, Copenhagen University, Copenhagen 2200, Denmark.
Qinsong LiuDepartment of Plant Biology, Uppsala BioCenter, Swedish University of Agricultural Sciences and Linnean Center of Plant Biology, SE-75007 Uppsala, Sweden.
Ramesh R VetukuriDepartment of Plant Biology, Uppsala BioCenter, Swedish University of Agricultural Sciences and Linnean Center of Plant Biology, SE-75007 Uppsala, Sweden.
Farid El KasmiHoward Hughes Medical Institute, Department of Biology, and Carolina Center for Genome Sciences, University of North Carolina, Chapel Hill, North Carolina 27599-3280.
Peter BrodersenDepartment of Biology, Copenhagen University, Copenhagen 2200, Denmark.
Ikuko Hara-NishimuraDepartment of Botany, Graduate School of Science, Kyoto University, Kyoto 606-8502, Japan.
Jeffery L DanglHoward Hughes Medical Institute, Department of Biology, and Carolina Center for Genome Sciences, University of North Carolina, Chapel Hill, North Carolina 27599-3280.
Morten PetersenDepartment of Biology, Copenhagen University, Copenhagen 2200, Denmark.
John MundyDepartment of Biology, Copenhagen University, Copenhagen 2200, Denmark.
Daniel HofiusDepartment of Biology, Copenhagen University, Copenhagen 2200, Denmark Department of Plant Biology, Uppsala BioCenter, Swedish University of Agricultural Sciences and Linnean Center of Plant Biology, SE-75007 Uppsala, Sweden daniel.hofius@slu.se.ORCID http://orcid.org/0000-0002-4854-9946
University of Copenhagen · DKSwedish University of Agricultural Sciences · SEUniversity of North Carolina at Chapel Hill · USKyoto University · JP

Funding

Howard Hughes Medical Institute
6 · The paper itself

Abstract

Membrane trafficking is required during plant immune responses, but its contribution to the hypersensitive response (HR), a form of programmed cell death (PCD) associated with effector-triggered immunity, is not well understood. HR is induced by nucleotide binding-leucine-rich repeat (NB-LRR) immune receptors and can involve vacuole-mediated processes, including autophagy. We previously isolated lazarus (laz) suppressors of autoimmunity-triggered PCD in the Arabidopsis thaliana mutant accelerated cell death11 (acd11) and demonstrated that the cell death phenotype is due to ectopic activation of the LAZ5 NB-LRR. We report here that laz4 is mutated in one of three VACUOLAR PROTEIN SORTING35 (VPS35) genes. We verify that LAZ4/VPS35B is part of the retromer complex, which functions in endosomal protein sorting and vacuolar trafficking. We show that VPS35B acts in an endosomal trafficking pathway and plays a role in LAZ5-dependent acd11 cell death. Furthermore, we find that VPS35 homologs contribute to certain forms of NB-LRR protein-mediated autoimmunity as well as pathogen-triggered HR. Finally, we demonstrate that retromer deficiency causes defects in late endocytic/lytic compartments and impairs autophagy-associated vacuolar processes. Our findings indicate important roles of retromer-mediated trafficking during the HR; these may include endosomal sorting of immune components and targeting of vacuolar cargo.

Indexed as

ApoptosisPlant ImmunityArabidopsisArabidopsis ProteinsAutophagyDisease ResistanceEndocytosisGenes, PlantGreen Fluorescent ProteinsMultiprotein ComplexesMultivesicular BodiesMutationPlant DiseasesProtein BindingProtein SubunitsProtein TransportArabidopsis ProteinsGreen Fluorescent ProteinsMultiprotein ComplexesProtein Subunits

Identifiers

PMID25681156
PMCPMC4456924
OpenAlexW2099444801

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.