Evidence map›Paper›PMID 25680588›Full record

ArticleToxicology and applied pharmacology2015

Environmental contaminants activate human and polar bear (Ursus maritimus) pregnane X receptors (PXR, NR1I2) differently.

Roger Lille-Langøy, Jared V Goldstone, Marte Rusten, Matthew R Milnes, Rune Male, John J Stegeman, Bruce Blumberg, Anders Goksøyr

Open access · hybridAbstract readComparative Study
In one paragraph

Article in Toxicology and applied pharmacology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 37 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Update of the risk assessment of hexabromocyclododecanes (HBCDDs) in food.EFSA journal. European Food Safety Authority · 2021
    Article
  8. Article
  9. Xenobiotic Receptors and Their Mates in Atopic Dermatitis.International journal of molecular sciences · 2019
    Review
  10. Article
  11. Article
  12. Sequence Variations in pxr (nr1i2) From Zebrafish (Danio rerio) Strains Affect Nuclear Receptor Function.Toxicological sciences : an official journal of the Society of Toxicology · 2019
    Article
  13. Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Roger Lille-LangøyUniversity of Bergen, Department of Biology, P.O. Box 7803, N-5020 Bergen, Norway. Electronic address: Roger.lille-langoy@bio.uib.no.
Jared V GoldstoneWoods Hole Oceanographic Institution, 266 Woods Hole Road, 02543-1050 Woods Hole, MA, USA.
Marte RustenUniversity of Bergen, Department of Molecular Biology, P.O. Box 7803, N-5020 Bergen, Norway.
Matthew R MilnesMars Hill University, 100 Athletic Street, Box 6671, Mars Hill, 28754 NC, USA.
Rune MaleUniversity of Bergen, Department of Molecular Biology, P.O. Box 7803, N-5020 Bergen, Norway.
John J StegemanWoods Hole Oceanographic Institution, 266 Woods Hole Road, 02543-1050 Woods Hole, MA, USA.
Bruce BlumbergUniversity of California, Irvine, 92697 CA, USA.
Anders GoksøyrUniversity of Bergen, Department of Biology, P.O. Box 7803, N-5020 Bergen, Norway.
University of Bergen · NOWoods Hole Oceanographic Institution · USMars Hill University · USUniversity of California, Irvine · US

Funding

Training CoreP42ES007381 · NIEHS · BOSTON UNIVERSITY MEDICAL CAMPUS · PI HAHN, MARK E · 1995 to 2019
$46.1M
TALENs-based PXR Knockout and Humanized ZebrafishR21HD073805 · NICHD · WOODS HOLE OCEANOGRAPHIC INSTITUTION · PI GOLDSTONE, JARED VERRILL · 2013 to 2014
$454k
NICHD NIH HHS R21 HD073805NICHD NIH HHS R21HD073805NIEHS NIH HHS 5P42ES007381NIEHS NIH HHS P42 ES007381
6 · The paper itself

Abstract

backgroundMany persistent organic pollutants (POPs) accumulate readily in polar bears because of their position as apex predators in Arctic food webs. The pregnane X receptor (PXR, formally NR1I2, here proposed to be named promiscuous xenobiotic receptor) is a xenobiotic sensor that is directly involved in metabolizing pathways of a wide range of environmental contaminants.

objectivesIn the present study, we comparably assess the ability of 51 selected pharmaceuticals, pesticides and emerging contaminants to activate PXRs from polar bears and humans using an in vitro luciferase reporter gene assay.

resultsWe found that polar bear PXR is activated by a wide range of our test compounds (68%) but has a slightly more narrow ligand specificity than human PXR that was activated by 86% of the 51 test compounds. The majority of the agonists identified (70%) produces a stronger induction of the reporter gene via human PXR than via polar bear PXR, however with some notable and environmentally relevant exceptions.

conclusionsDue to the observed differences in activation of polar bear and human PXRs, exposure of each species to environmental agents is likely to induce biotransformation differently in the two species. Bioinformatics analyses and structural modeling studies suggest that amino acids that are not part of the ligand-binding domain and do not interact with the ligand can modulate receptor activation.

Indexed as

Amino Acid SequenceAnimalsBinding SitesChlorocebus aethiopsCloning, MolecularCOS CellsDose-Response Relationship, DrugEnvironmental PollutantsEvolution, MolecularGenes, ReporterHumansLigandsModels, MolecularMolecular Sequence DataMolecular StructurePregnane X ReceptorEnvironmental PollutantsLigandsNR1I2 protein, humanPregnane X ReceptorReceptors, SteroidEnvironmental pollutantsHumanIn vitro ligand activationPolar bearPregnane X receptor

Identifiers

PMID25680588
PMCPMC4387200
OpenAlexW2028742924

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.