Evidence map›Paper›PMID 25680358›Full record

ReviewCurrent genetics2015

A complex path for domestication of B. subtilis sociality.

Shaul Pollak, Shira Omer Bendori, Avigdor Eldar

Abstract readReview
PubMed Publisher
In one paragraph

Review in Current genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Article
  3. The putative role of the epipeptide EpeX inMicrobiology (Reading, England) · 2023
    Article
  4. Article
  5. Article
  6. Review
  7. Review
  8. A single mutation inCommunications biology · 2018
    Article
  9. Article
  10. Review
  11. Review
  12. Review
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Shaul PollakDepartment of Molecular Microbiology and Biotechnology, Tel Aviv University, 69978, Tel Aviv, Israel.
Shira Omer BendoriDepartment of Molecular Microbiology and Biotechnology, Tel Aviv University, 69978, Tel Aviv, Israel.
Avigdor EldarDepartment of Molecular Microbiology and Biotechnology, Tel Aviv University, 69978, Tel Aviv, Israel. avigdor@gmail.com.
Tel Aviv University · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microorganisms adapt to the lab environment by eliminating unnecessary genetic systems. In Bacillus subtilis, such adaptation resulted in the lab strain being unable to form complex, matrix-associated structures known as biofilms. We recently showed that the ancestor of the lab strain, which is considered by the research community to be a stereotypical 'wild' strain, carries an atypical mutation in the RapP-PhrP quorum-sensing system. We have found that this mutation has profound effects on the biofilm phenotype of the ancestral strain. Here we discuss these recent findings and present more data that focuses on the lessons that can be learned from this work on the domestication of microorganisms.

Indexed as

Gene Expression Regulation, BacterialAdaptation, PhysiologicalBacillus subtilisBacterial ProteinsBiofilmsBiological EvolutionDNA-Binding ProteinsGenetic LociMutationPlasmidsQuorum SensingSelection, GeneticTranscription FactorsBacterial ProteinsComA protein, BacteriaDNA-Binding ProteinsSpo0A protein, Bacillus subtilisTranscription FactorsBacillus subtilisBiofilmDomesticationEvolutionPeptide signalingQuorum sensing

Identifiers

PMID25680358
OpenAlexW2074970407

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.