Evidence map›Paper›PMID 25677543›Full record

ArticlePhysiological reports2015

Pattern recognition receptors in the gut: analysis of their expression along the intestinal tract and the crypt/villus axis.

Pascal Gourbeyre, Mustapha Berri, Yannick Lippi, François Meurens, Silvia Vincent-Naulleau, Joëlle Laffitte, Claire Rogel-Gaillard, Philippe Pinton, Isabelle P Oswald

Open access · goldAbstract read
In one paragraph

Article in Physiological reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 57 citations in OpenAlex.

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  13. Short-term exposure to urban PMPhysiological reports · 2022
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  14. Effects ofFrontiers in microbiology · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Pascal GourbeyreINRA, UMR1331, Toxalim, Toxicologie Alimentaire, Toulouse, France Université de Toulouse, INP, UMR1331, Toxalim, Toulouse, France.
Mustapha BerriINRA, UR1282, ISP, Infectiologie et Santé Publique, Nouzilly, France Université François Rabelais, UMR1282 Infectiologie et Santé Publique, Tours, France.
Yannick LippiINRA, UMR1331, Toxalim, Toxicologie Alimentaire, Toulouse, France Université de Toulouse, INP, UMR1331, Toxalim, Toulouse, France.
François MeurensINRA, UR1282, ISP, Infectiologie et Santé Publique, Nouzilly, France Université François Rabelais, UMR1282 Infectiologie et Santé Publique, Tours, France Vaccine and Infectious Disease Organization-International Vaccine Centre (VIDO-InterVac), University of Saskatchewan, Saskatoon, Saskatchewan, Canada.
Silvia Vincent-NaulleauINRA, UMR1313, Génétique Animale et Biologie Intégrative, Jouy-en-Josas, France AgroParisTech, UMR1313 Génétique Animale et Biologie Intègrative, Jouy-en-Josas, France CEA, DSV, IRCM, Laboratoire de Radiobiologie et Etude du Génome, Domaine de Vilvert, Jouy-en-Josas, France.
Joëlle LaffitteINRA, UMR1331, Toxalim, Toxicologie Alimentaire, Toulouse, France Université de Toulouse, INP, UMR1331, Toxalim, Toulouse, France.
Claire Rogel-GaillardINRA, UMR1313, Génétique Animale et Biologie Intégrative, Jouy-en-Josas, France AgroParisTech, UMR1313 Génétique Animale et Biologie Intègrative, Jouy-en-Josas, France.
Philippe PintonINRA, UMR1331, Toxalim, Toxicologie Alimentaire, Toulouse, France Université de Toulouse, INP, UMR1331, Toxalim, Toulouse, France.
Isabelle P OswaldINRA, UMR1331, Toxalim, Toxicologie Alimentaire, Toulouse, France Université de Toulouse, INP, UMR1331, Toxalim, Toulouse, France.
Université Fédérale de Toulouse Midi-Pyrénées · FRInfectiologie Animale et Santé Publique · FRAgroParisTech · FRGénétique Animale et Biologie Intégrative · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pattern recognition receptors (PRRs) play a critical role in the detection of microorganisms and the induction of inflammatory and immune responses. Using PCR and Western-blot analysis, this study investigated the differential expression in the intestine of 14 PRRs and nine associated cytokines. Thirty-two pigs were used to determine the expression of these markers (1) along the proximal/distal axis of the small intestine (duodenum, jejunum, and ileum) and (2) between the intestinal segments and their respective lymphoid organs (Peyer's patches [PP] and mesenteric lymph nodes [MLN]). Six additional animals were used to quantify the expression of these genes along the crypt/villus axis of jejunum, using microdissected samples. Most genes showed increased expression (1) in the distal than in the proximal parts of the small intestine (TLR3, 5, RIG-I, IL-1β, IL-8, and IFN-γ); (2) in lymphoid organs (TLR1, 2, 6, 9, 10, IL-10, TNF-α), especially the MLN (TLR4, 7, 8, NOD1, NOD2, NALP3, IFN-α, IL-6, IL-12, and TGF-β), than in intestinal segments. The analysis along the crypt/villus identified: (1) genes with higher expression in lamina propria (TLR1, 2, 4, 9, NOD1, NOD2, IL-1β, IL-10, TGF-β, TNF-α) and (2) genes with higher expression in the villus (TLR3, 5, 6, RIG-I, IL-6). These results highlight the differential expression of PRRs and cytokines along the proximal/distal and the crypt/villus axis of the intestine, contributing to a fine analysis of the complex functional architecture of the small intestine and should be related to the gut microbiota.

Indexed as

Immune systemNODpigRIG‐Ismall intestineTLR

Identifiers

PMID25677543
PMCPMC4393184
OpenAlexW2107567132

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.