Evidence map›Paper›PMID 25676190›Full record

ReviewChembiochem : a European journal of chemical biology2015

Using modern tools to probe the structure-function relationship of fatty acid synthases.

Kara Finzel, D John Lee, Michael D Burkart

Open access · greenAbstract readReview
In one paragraph

Review in Chembiochem : a European journal of chemical biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
5.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 68 citations in OpenAlex.

  1. Article
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  12. Control of Unsaturation inBiochemistry · 2022
    Article
  13. Article
  14. Review
  15. Review
  16. Lessons in Organic Fluorescent Probe Discovery.Chembiochem : a European journal of chemical biology · 2021
    Review
  17. Article
  18. Article
  19. Interfacial plasticity facilitates high reaction rate ofProceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  20. Modifying the Thioester Linkage Affects the Structure of the Acyl Carrier Protein.Angewandte Chemie (International ed. in English) · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Kara Finzel *Department of Chemistry and Biochemistry, University of California, San Diego, La Jolla, California 92093-0358 (USA).
D John Lee *Department of Chemistry and Biochemistry, University of California, San Diego, La Jolla, California 92093-0358 (USA).
Michael D BurkartDepartment of Chemistry and Biochemistry, University of California, San Diego, La Jolla, California 92093-0358 (USA).
University of California, San Diego · US

Funding

Protein-Protein Interactions in Natural Product BiosynthesisR01GM095970 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BURKART, MICHAEL D. · 2012 to 2025
$5.9M
Site Specific Protein Labeling In Vivo Through Genetically Engineered PhosphopantR01GM086225 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BURKART, MICHAEL D. · 2008 to 2011
$2.4M
OASIS to identify and analyze natural product biosynthesisR01GM094924 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BURKART, MICHAEL D. · 2010 to 2013
$1.2M
NIGMS NIH HHS R01 GM086225NIGMS NIH HHS R01 GM094924NIGMS NIH HHS R01 GM095970PHS HHS R01M086225PHS HHS R01M094924
6 · The paper itself

Abstract

Fatty acid biosynthesis is essential to life and represents one of the most conserved pathways in nature, preserving the same handful of chemical reactions across all species. Recent interest in the molecular details of the de novo fatty acid synthase (FAS) has been heightened by demand for renewable fuels and the emergence of multidrug-resistant bacterial strains. Central to FAS is the acyl carrier protein (ACP), a protein chaperone that shuttles the growing acyl chain between catalytic enzymes within the FAS. Human efforts to alter fatty acid biosynthesis for oil production, chemical feedstock, or antimicrobial purposes has been met with limited success, due in part to a lack of detailed molecular information behind the ACP-partner protein interactions inherent to the pathway. This review will focus on recently developed tools for the modification of ACP and analysis of protein-protein interactions, such as mechanism-based crosslinking, and the studies exploiting them. Discussion specific to each enzymatic domain will focus first on mechanism and known inhibitors, followed by available structures and known interactions with ACP. Although significant unknowns remain, new understandings of the intricacies of FAS point to future advances in manipulating this complex molecular factory.

Indexed as

Acyl Carrier ProteinAnimalsFatty Acid SynthasesHumansModels, MolecularProtein Interaction MappingAcyl Carrier ProteinFatty Acid Synthasesacyl carrier proteinbiosynthesiscrosslinkersfatty acidsinhibitors

Identifiers

PMID25676190
PMCPMC4545599
OpenAlexW1963741926

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.