Evidence map›Paper›PMID 25675502›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

Extensive tissue-related and allele-related mtDNA heteroplasmy suggests positive selection for somatic mutations.

Mingkun Li, Roland Schröder, Shengyu Ni, Burkhard Madea, Mark Stoneking

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 142 papers.

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0cells of the map it votes in
142citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

142 citing papers in PubMed.

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  12. Mitochondrial haplogroups, but not heteroplasmy, are associated with midlife cognitive function.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2025
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82 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

5 authors.

Mingkun LiDepartment of Evolutionary Genetics, Max Planck Institute for Evolutionary Anthropology, D04103 Leipzig, Germany; Fondation Mérieux, Lyon 69002, France; and.
Roland SchröderDepartment of Evolutionary Genetics, Max Planck Institute for Evolutionary Anthropology, D04103 Leipzig, Germany;
Shengyu NiDepartment of Evolutionary Genetics, Max Planck Institute for Evolutionary Anthropology, D04103 Leipzig, Germany;
Burkhard MadeaInstitut für Rechtsmedizin, Universitätsklinikum Bonn, D53111 Bonn, Germany.
Mark StonekingDepartment of Evolutionary Genetics, Max Planck Institute for Evolutionary Anthropology, D04103 Leipzig, Germany; stoneking@eva.mpg.de.

Funding

Howard Hughes Medical Institute
6 · The paper itself

Abstract

Heteroplasmy in human mtDNA may play a role in cancer, other diseases, and aging, but patterns of heteroplasmy variation across different tissues have not been thoroughly investigated. Here, we analyzed complete mtDNA genome sequences at ∼3,500× average coverage from each of 12 tissues obtained at autopsy from each of 152 individuals. We identified 4,577 heteroplasmies (with an alternative allele frequency of at least 0.5%) at 393 positions across the mtDNA genome. Surprisingly, different nucleotide positions (nps) exhibit high frequencies of heteroplasmy in different tissues, and, moreover, heteroplasmy is strongly dependent on the specific consensus allele at an np. All of these tissue-related and allele-related heteroplasmies show a significant age-related accumulation, suggesting positive selection for specific alleles at specific positions in specific tissues. We also find a highly significant excess of liver-specific heteroplasmies involving nonsynonymous changes, most of which are predicted to have an impact on protein function. This apparent positive selection for reduced mitochondrial function in the liver may reflect selection to decrease damaging byproducts of liver mitochondrial metabolism (i.e., "survival of the slowest"). Overall, our results provide compelling evidence for positive selection acting on some somatic mtDNA mutations.

Indexed as

AllelesSelection, GeneticAdolescentAdultAgedAged, 80 and overBase SequenceChildChild, PreschoolDNA, MitochondrialHumansInfantInfant, NewbornLiverMiddle AgedMolecular Sequence DataDNA, MitochondrialheteroplasmyhumanmtDNAselectiontissue variation

Identifiers

PMID25675502
PMCPMC4345623

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.