Evidence map›Paper›PMID 25674601›Full record

ArticleVirusdisease2014

Molecular characterization and field survey of Iranian potato virus X isolates.

Hossain Massumi, Soodabe Poormohammadi, Shabnam Pishyar, Mohammad Maddahian, Jahangir Heydarnejad, Akbar Hosseini-Pour, Katherine van Bysterveldt, Arvind Varsani

Abstract read
In one paragraph

Article in Virusdisease, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Plant Virus Nanoparticles for Anti-cancer Therapy.Frontiers in bioengineering and biotechnology · 2021
    Review
  5. Pest categorisation of potato virus X (non-EU isolates).EFSA journal. European Food Safety Authority · 2020
    Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Hossain MassumiDepartment of Plant Protection, College of Agriculture, Shahid Bahonar University of Kerman, Kerman, Iran.
Soodabe PoormohammadiDepartment of Plant Protection, College of Agriculture, Shahid Bahonar University of Kerman, Kerman, Iran.
Shabnam PishyarDepartment of Plant Protection, College of Agriculture, Shahid Bahonar University of Kerman, Kerman, Iran.
Mohammad MaddahianDepartment of Plant Protection, College of Agriculture, Shahid Bahonar University of Kerman, Kerman, Iran.
Jahangir HeydarnejadDepartment of Plant Protection, College of Agriculture, Shahid Bahonar University of Kerman, Kerman, Iran.
Akbar Hosseini-PourDepartment of Plant Protection, College of Agriculture, Shahid Bahonar University of Kerman, Kerman, Iran.
Katherine van BysterveldtSchool of Biological Sciences, University of Canterbury, Private Bag 4800, Christchurch, 8140 New Zealand.
Arvind VarsaniSchool of Biological Sciences, University of Canterbury, Private Bag 4800, Christchurch, 8140 New Zealand ; Biomolecular Interaction Centre, University of Canterbury, Private Bag 4800, Christchurch, 8140 New Zealand ; Electron Microscope Unit, Division of Medical Biochemistry, Department of Clinical Laboratory Sciences, University of Cape Town, Cape Town, 7925 South Africa.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Six hundred and one symptomatic potato samples were collected from nine provinces in Iran. Screening by double-antibody sandwich enzyme linked immunosorbent assay using a potato virus X (PVX) together with a few potyviruses polyclonal antibodies, produced positive reactions in 4.3 % of samples against PVX. Based on symptoms on different test plant, the isolates were divided into two groups: the first groups causing blistering and malformation of leaves and the second showed mild mosaic and vein clearing in Nicotiana glutinosa. The almost complete nucleotide sequence of two isolates as a representative of severe and a mild isolates were determined. Genomes of two PVX Iranian isolates are identical to that of the most PVX isolates comprise 6435 nucleotides in length excluding 101 nucleotide in the 5' end of the genome and shares 94.8-96.7 % identities with European and Asian, and 77-96.1 % with American isolates. Furthermore, the 3'-terminal sequences, including the coat protein coding region of other 13 Iranian isolates were determined and compared with the GenBank sequences. Phylogenetic analysis of the cp gene of 13 Iranian isolates together all those available in public databases indicated that the 13 Iranian isolates all belong to low diversity clade I.

Indexed as

Complete genomeIranPhylogenetic analysisPotato virus X

Identifiers

PMID25674601
PMCPMC4188192

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.