Evidence map›Paper›PMID 25673565›Full record

ArticleScientific reports2015

A statistically inferred microRNA network identifies breast cancer target miR-940 as an actin cytoskeleton regulator.

Ricky Bhajun, Laurent Guyon, Amandine Pitaval, Eric Sulpice, Stéphanie Combe, Patricia Obeid, Vincent Haguet, Itebeddine Ghorbel, Christian Lajaunie, Xavier Gidrol

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 31 citations in OpenAlex.

  1. JHDM1D-AS1-driven inhibition of miR-940 releases ARTN expression to induce breast carcinogenesis.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2023
    Article
  2. Article
  3. Argonaute4 Modulates Resistance toPlant physiology · 2020
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  9. Using microRNA Networks to Understand Cancer.International journal of molecular sciences · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Ricky Bhajun1] Univ. Grenoble Alpes, iRTSV-BGE, F-38000 Grenoble, France [2] CEA, iRTSV-BGE, F-38000 Grenoble, France [3] INSERM, BGE, F-38000 Grenoble, France.
Laurent Guyon1] Univ. Grenoble Alpes, iRTSV-BGE, F-38000 Grenoble, France [2] CEA, iRTSV-BGE, F-38000 Grenoble, France [3] INSERM, BGE, F-38000 Grenoble, France.
Amandine Pitaval1] Univ. Grenoble Alpes, iRTSV-BGE, F-38000 Grenoble, France [2] CEA, iRTSV-BGE, F-38000 Grenoble, France [3] INSERM, BGE, F-38000 Grenoble, France.
Eric Sulpice1] Univ. Grenoble Alpes, iRTSV-BGE, F-38000 Grenoble, France [2] CEA, iRTSV-BGE, F-38000 Grenoble, France [3] INSERM, BGE, F-38000 Grenoble, France.
Stéphanie Combe1] Univ. Grenoble Alpes, iRTSV-BGE, F-38000 Grenoble, France [2] CEA, iRTSV-BGE, F-38000 Grenoble, France [3] INSERM, BGE, F-38000 Grenoble, France.
Patricia Obeid1] Univ. Grenoble Alpes, iRTSV-BGE, F-38000 Grenoble, France [2] CEA, iRTSV-BGE, F-38000 Grenoble, France [3] INSERM, BGE, F-38000 Grenoble, France.
Vincent Haguet1] Univ. Grenoble Alpes, iRTSV-BGE, F-38000 Grenoble, France [2] CEA, iRTSV-BGE, F-38000 Grenoble, France [3] INSERM, BGE, F-38000 Grenoble, France.
Itebeddine Ghorbel1] Univ. Grenoble Alpes, iRTSV-BGE, F-38000 Grenoble, France [2] CEA, iRTSV-BGE, F-38000 Grenoble, France [3] INSERM, BGE, F-38000 Grenoble, France.
Christian Lajaunie1] Center for Computational Biology - CBIO, Mines ParisTech, F-77300 Fontainebleau, France [2] Institut Curie, F-75248 Paris, France [3] INSERM, U900, F-75248 Paris, France.
Xavier Gidrol1] Univ. Grenoble Alpes, iRTSV-BGE, F-38000 Grenoble, France [2] CEA, iRTSV-BGE, F-38000 Grenoble, France [3] INSERM, BGE, F-38000 Grenoble, France.
Université Grenoble Alpes · FRCEA Grenoble · FRCommissariat à l'Énergie Atomique et aux Énergies Alternatives · FRÉcole Nationale Supérieure des Mines de Paris · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MiRNAs are key regulators of gene expression. By binding to many genes, they create a complex network of gene co-regulation. Here, using a network-based approach, we identified miRNA hub groups by their close connections and common targets. In one cluster containing three miRNAs, miR-612, miR-661 and miR-940, the annotated functions of the co-regulated genes suggested a role in small GTPase signalling. Although the three members of this cluster targeted the same subset of predicted genes, we showed that their overexpression impacted cell fates differently. miR-661 demonstrated enhanced phosphorylation of myosin II and an increase in cell invasion, indicating a possible oncogenic miRNA. On the contrary, miR-612 and miR-940 inhibit phosphorylation of myosin II and cell invasion. Finally, expression profiling in human breast tissues showed that miR-940 was consistently downregulated in breast cancer tissues.

Indexed as

Gene Expression Regulation, NeoplasticActin CytoskeletonBreast NeoplasmsCell MovementCell ProliferationComputational BiologyDatabases, Nucleic AcidFemaleGene Expression ProfilingGene OntologyGene Regulatory NetworksHumansMicroRNAsMolecular Sequence AnnotationMonomeric GTP-Binding ProteinsSignal TransductionMicroRNAsMIRN940 microRNA, humanMonomeric GTP-Binding Proteins

Identifiers

PMID25673565
PMCPMC5389139
OpenAlexW1982762466

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.