Evidence map›Paper›PMID 25671322›Full record

ArticlePloS one2015

A reverse taxonomic approach to assess macrofaunal distribution patterns in abyssal Pacific polymetallic nodule fields.

Annika Janssen, Stefanie Kaiser, Karin Meißner, Nils Brenke, Lenaick Menot, Pedro Martínez Arbizu

Abstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

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  7. PeerJ · 2020
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  12. Urinary microbiome of kidney transplant patients reveals dysbiosis with potential for antibiotic resistance.Translational research : the journal of laboratory and clinical medicine · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Annika JanssenSenckenberg am Meer, Deutsches Zentrum für Marine Biodiversitätsforschung, Südstrand 44, 26382, Wilhelmshaven, Germany.
Stefanie KaiserSenckenberg am Meer, Deutsches Zentrum für Marine Biodiversitätsforschung, Südstrand 44, 26382, Wilhelmshaven, Germany.
Karin MeißnerSenckenberg am Meer, Deutsches Zentrum für Marine Biodiversitätsforschung, Biozentrum Grindel, Martin-Luther-King Platz 3, 20146, Hamburg, Germany.
Nils BrenkeSenckenberg am Meer, Deutsches Zentrum für Marine Biodiversitätsforschung, Südstrand 44, 26382, Wilhelmshaven, Germany.
Lenaick MenotInstitut Français de Recherche pour l´Exploitation de la Mer, Centre de Brest BP 70, 29280, Plouzané, France.
Pedro Martínez ArbizuSenckenberg am Meer, Deutsches Zentrum für Marine Biodiversitätsforschung, Südstrand 44, 26382, Wilhelmshaven, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Heightened interest in the exploitation of deep seafloor minerals is raising questions on the consequences for the resident fauna. Assessing species ranges and determination of processes underlying current species distributions are prerequisites to conservation planning and predicting faunal responses to changing environmental conditions. The abyssal central Pacific nodule belt, located between the Clarion and Clipperton Fracture Zones (CCZ), is an area prospected for mining of polymetallic nodules. We examined variations in genetic diversity and broad-scale connectivity of isopods and polychaetes across the CCZ. Faunal assemblages were studied from two mining claims (the eastern German and French license areas) located 1300 km apart and influenced by different productivity regimes. Using a reverse taxonomy approach based on DNA barcoding, we tested to what extent distance and large-scale changes in environmental parameters lead to differentiation in two macrofaunal taxa exhibiting different functions and life-history patterns. A fragment of the mitochondrial gene Cytochrome Oxidase Subunit 1 (COI) was analyzed. At a 97% threshold the molecular operational taxonomic units (MOTUs) corresponded well to morphological species. Molecular analyses indicated high local and regional diversity mostly because of large numbers of singletons in the samples. Consequently, variation in composition of genotypic clusters between sites was exceedingly large partly due to paucity of deep-sea sampling and faunal patchiness. A higher proportion of wide-ranging species in polychaetes was contrasted with mostly restricted distributions in isopods. Remarkably, several cryptic lineages appeared to be sympatric and occurred in taxa with putatively good dispersal abilities, whereas some brooding lineages revealed broad distributions across the CCZ. Geographic distance could explain variation in faunal connectivity between regions and sites to some extent, while assumed dispersal capabilities were not as important.

Indexed as

AnimalsAquatic OrganismsBiodiversityClassificationMineralsMolecular Sequence DataPacific OceanMinerals

Identifiers

PMID25671322
PMCPMC4324633

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.