Evidence map›Paper›PMID 25670852›Full record

ArticleThe Journal of biological chemistry2015

Multiple driving forces required for efficient secretion of autotransporter virulence proteins.

Igor Drobnak, Esther Braselmann, Patricia L Clark

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Identification of an on-pathway intermediate illuminates the kinetic competition between protein folding and misfolding.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  3. Article
  4. Article
  5. Threading single proteins through pores to compare their energy landscapes.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  6. Article
  7. Properties of protein unfolded states suggest broad selection for expanded conformational ensembles.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Biological Functions of the Secretome ofFrontiers in cellular and infection microbiology · 2017
    Review
  14. Review
  15. Article
  16. Article
  17. Review
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Igor DrobnakFrom the Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, Indiana 46556.
Esther BraselmannFrom the Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, Indiana 46556.
Patricia L ClarkFrom the Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, Indiana 46556 pclark1@nd.edu.
University of Notre Dame · US

Funding

Chemistry-Biochemistry-Biology Training Program at Notre DameT32GM075762 · NIGMS · UNIVERSITY OF NOTRE DAME · PI CHANG, MAYLAND F, MOBASHERY, SHAHRIAR · 2007 to 2021
$3.7M
OUTER MEMBRANE SECRETION MECHANISM FOR AUTOTRANSPORTER PROTEINSR01GM097573 · NIGMS · UNIVERSITY OF NOTRE DAME · PI CLARK, PATRICIA LOUISE · 2011 to 2014
$1.1M
NIGMS NIH HHS R01 GM097573NIGMS NIH HHS T32 GM075762
6 · The paper itself

Abstract

Autotransporter (AT) proteins are a broad class of virulence proteins from Gram-negative bacterial pathogens that require their own C-terminal transmembrane domain to translocate their N-terminal passenger across the bacterial outer membrane (OM). But given the unavailability of ATP or a proton gradient across the OM, it is unknown what energy source(s) drives this process. Here we used a combination of computational and experimental approaches to quantitatively compare proposed AT OM translocation mechanisms. We show directly for the first time that when translocation was blocked an AT passenger remained unfolded in the periplasm. We demonstrate that AT secretion is a kinetically controlled, non-equilibrium process coupled to folding of the passenger and propose a model connecting passenger conformation to secretion kinetics. These results reconcile seemingly contradictory reports regarding the importance of passenger folding as a driving force for OM translocation but also reveal that another energy source is required to initiate translocation.

Indexed as

Bacterial Outer Membrane Proteinsbeta-LactamasesBordetella pertussisEscherichia coliGene ExpressionKineticsMolecular Dynamics SimulationMutationPeriplasmPlasmidsPromoter Regions, GeneticProtein FoldingProtein Structure, SecondaryProtein Structure, TertiaryProtein TransportRecombinant ProteinsBacterial Outer Membrane Proteinsbeta-LactamasespertactinRecombinant ProteinsVirulence Factors, BordetellaAutotransporterBioenergeticsKineticsOuter MembranePeriplasmProtein FoldingProtein SecretionThermodynamicsTranslocationVirulence Factor

Identifiers

PMID25670852
PMCPMC4400326
OpenAlexW1993568444

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.