Evidence map›Paper›PMID 25670770›Full record

ArticleG3 (Bethesda, Md.)2015

Adaptive evolution of genes involved in the regulation of germline stem cells in Drosophila melanogaster and D. simulans.

Heather A Flores, Vanessa L Bauer DuMont, Aalya Fatoo, Diana Hubbard, Mohammed Hijji, Daniel A Barbash, Charles F Aquadro

Abstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Heather A FloresDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, New York 14853.
Vanessa L Bauer DuMontDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, New York 14853.
Aalya FatooDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, New York 14853.
Diana HubbardDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, New York 14853.
Mohammed HijjiDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, New York 14853.
Daniel A BarbashDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, New York 14853.
Charles F AquadroDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, New York 14853 cfa1@cornell.edu.

Funding

PREDOCTORAL TRAINING IN GENETICS AND DEVELOPMENTT32GM007617 · NIGMS · CORNELL UNIVERSITY ITHACA · PI BARBASH, DANIEL A · 1985 to 2021
$5.5M
Adaptive Protein Evolution of the Drosophila Germline Stem Cell Gene Bag of MarblesR01GM095793 · NIGMS · CORNELL UNIVERSITY · PI AQUADRO, CHARLES F · 2011 to 2024
$3.9M
NIGMS NIH HHS R01 GM095793NIGMS NIH HHS T32 GM007617
6 · The paper itself

Abstract

Population genetic and comparative analyses in diverse taxa have shown that numerous genes involved in reproduction are adaptively evolving. Two genes involved in germline stem cell regulation, bag of marbles (bam) and benign gonial cell neoplasm (bgcn), have been shown previously to experience recurrent, adaptive evolution in both Drosophila melanogaster and D. simulans. Here we report a population genetic survey on eight additional genes involved in germline stem cell regulation in D. melanogaster and D. simulans that reveals all eight of these genes reject a neutral model of evolution in at least one test and one species after correction for multiple testing using a false-discovery rate of 0.05. These genes play diverse roles in the regulation of germline stem cells, suggesting that positive selection in response to several evolutionary pressures may be acting to drive the adaptive evolution of these genes.

Indexed as

AnimalsBase SequenceBiological EvolutionDNA HelicasesDrosophilaDrosophila ProteinsEvolution, MolecularGenomeGerm CellsMolecular Sequence DataPolymorphism, GeneticStem Cellsbam protein, Drosophilabgcn protein, DrosophilaDNA HelicasesDrosophila Proteinsadaptive evolutiongermline stem cellsoogenesispositive selectionspermatogenesis

Identifiers

PMID25670770
PMCPMC4390574

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.