Evidence map›Paper›PMID 25670768›Full record

ArticleThe Plant cell2015

InsP6-sensitive variants of the Gle1 mRNA export factor rescue growth and fertility defects of the ipk1 low-phytic-acid mutation in Arabidopsis.

Ho-Seok Lee, Du-Hwa Lee, Hui Kyung Cho, Song Hee Kim, Joong Hyuck Auh, Hyun-Sook Pai

Open access · greenAbstract read
In one paragraph

Article in The Plant cell, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
9.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 89 citations in OpenAlex.

  1. Review
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  4. Evolution and diversification of the nuclear pore complex.Biochemical Society transactions · 2021
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  12. Plants (Basel, Switzerland) · 2020
    Article
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  14. Role for ArabidopsisFrontiers in plant science · 2018
    Article
  15. Nup42 and IPTraffic (Copenhagen, Denmark) · 2017
    Article
  16. The Plant cell · 2017
    Article
  17. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Ho-Seok LeeDepartment of Systems Biology, Yonsei University, Seoul 120-749, Korea.
Du-Hwa LeeDepartment of Systems Biology, Yonsei University, Seoul 120-749, Korea.
Hui Kyung ChoDepartment of Systems Biology, Yonsei University, Seoul 120-749, Korea.
Song Hee KimDivision of Food Science and Technology, Chung-Ang University, Ansung, Kyunggi-do 456-756, Korea.
Joong Hyuck AuhDivision of Food Science and Technology, Chung-Ang University, Ansung, Kyunggi-do 456-756, Korea.
Hyun-Sook PaiDepartment of Systems Biology, Yonsei University, Seoul 120-749, Korea hspai@yonsei.ac.kr.
Yonsei University · KRChung-Ang University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Myo-inositol-1,2,3,4,5,6-hexakisphosphate (InsP(6)), also known as phytic acid, accumulates in large quantities in plant seeds, serving as a phosphorus reservoir, but is an animal antinutrient and an important source of water pollution. Here, we report that Gle1 (GLFG lethal 1) in conjunction with InsP(6) functions as an activator of the ATPase/RNA helicase LOS4 (low expression of osmotically responsive genes 4), which is involved in mRNA export in plants, supporting the Gle1-InsP(6)-Dbp5 (LOS4 homolog) paradigm proposed in yeast. Interestingly, plant Gle1 proteins have modifications in several key residues of the InsP(6) binding pocket, which reduce the basicity of the surface charge. Arabidopsis thaliana Gle1 variants containing mutations that increase the basic charge of the InsP(6) binding surface show increased sensitivity to InsP(6) concentrations for the stimulation of LOS4 ATPase activity in vitro. Expression of the Gle1 variants with enhanced InsP(6) sensitivity rescues the mRNA export defect of the ipk1 (inositol 1,3,4,5,6-pentakisphosphate 2-kinase) InsP(6)-deficient mutant and, furthermore, significantly improves vegetative growth, seed yield, and seed performance of the mutant. These results suggest that Gle1 is an important factor responsible for mediating InsP(6) functions in plant growth and reproduction and that Gle1 variants with increased InsP(6) sensitivity may be useful for engineering high-yielding low-phytate crops.

Indexed as

RNA TransportAmino AcidsArabidopsisArabidopsis ProteinsBinding SitesCytosolDEAD-box RNA HelicasesFertilityGene SilencingMutationNicotianaNuclear EnvelopeNuclear Pore Complex ProteinsPhenotypePhosphotransferases (Alcohol Group Acceptor)Phytic AcidAmino AcidsArabidopsis ProteinsDEAD-box RNA HelicasesGle1 protein, Arabidopsisinositol 1,3,4,5,6-pentakisphosphate 2-kinase, ArabidopsisLOS4 protein, ArabidopsisNuclear Pore Complex ProteinsPhosphotransferases (Alcohol Group Acceptor)Phytic AcidRNA, Messenger

Identifiers

PMID25670768
PMCPMC4456929
OpenAlexW2069460765

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.