Evidence map›Paper›PMID 25668207›Full record

ArticlePloS one2015

Genetic investigation of bisphosphonate-related osteonecrosis of jaw (BRONJ) via whole exome sequencing and bioinformatics.

Jee-Hwan Kim, Yong Jae Ko, Ji-young Kim, Yoonsoo Oh, Jihye Hwang, Sangjin Han, Sanguk Kim, Jae-Hoon Lee, Dong-Hoo Han

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 20 citations in OpenAlex.

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  11. [Research progress on bisphosphonate-related osteonecrosis of the jaws].Hua xi kou qiang yi xue za zhi = Huaxi kouqiang yixue zazhi = West China journal of stomatology · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Jee-Hwan KimDepartment of Prosthodontics, College of Dentistry, Yonsei University, Seoul, Korea.
Yong Jae KoDepartment of Prosthodontics, College of Dentistry, Yonsei University, Seoul, Korea.
Ji-young KimDepartment of Prosthodontics, College of Dentistry, Yonsei University, Seoul, Korea.
Yoonsoo OhDepartment of Prosthodontics, College of Dentistry, Yonsei University, Seoul, Korea.
Jihye HwangDepartment of IT Convergence and Engineering, Pohang University of Science and Technology, Pohang, Korea.
Sangjin HanDepartment of Life Sciences, Pohang University of Science and Technology, Pohang, Korea.
Sanguk KimDepartment of Life Sciences, Pohang University of Science and Technology, Pohang, Korea.
Jae-Hoon LeeDepartment of Prosthodontics, College of Dentistry, Yonsei University, Seoul, Korea.
Dong-Hoo HanDepartment of Prosthodontics, College of Dentistry, Yonsei University, Seoul, Korea.
Yonsei University · KRPohang University of Science and Technology · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Complications associated with the use of bisphosphonate (BP) have risen over the years due to an increase in the prescription of BP. BP-related osteonecrosis of jaw (BRONJ), one of the complications linked to the consumption of BP, greatly affects patients with minor dental trauma, incurring a long healing period. While BRONJ afflicts only a minority of patients prescribed with BP, BRONJ is a multigenic disease affected both by environmental and genetic factors having a distinctive phenotype. This study aims to discover genetic biomarkers associated with BRONJ via whole exome sequencing (WES) followed by statistical analysis. Sixteen individuals who had been prescribed with bisphosphonate medication and diagnosed as BRONJ were chosen and each individual's saliva sample was collected for WES. 126 randomized subsamples from the GSK project representing 109 male and 17 female Koreans were used as a control data set. Fisher's exact test was carried out to assess the significance of genetic variants in BRONJ patients. Gene set enrichment analysis (GSEA) (DAVID Bioinformatics Resource 6.7) was used to perform a cluster analysis of variants found from Fisher's exact test. The results from this study suggest that BRONJ-inducing factors are genetically associated and BRONJ occurs due to the malfunctioning of post-translational modification in osteoclast leading to the impairment of cell morphology and adhesion.

Indexed as

GenomicsAgedAged, 80 and overBisphosphonate-Associated Osteonecrosis of the JawExomeFemaleHumansMaleMiddle Aged

Identifiers

PMID25668207
PMCPMC4337898
OpenAlexW2129939805

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.