Evidence map›Paper›PMID 25667412›Full record

ArticleThe Journal of general physiology2015

Structural and functional properties of ryanodine receptor type 3 in zebrafish tail muscle.

Stefano Perni, Kurt C Marsden, Matias Escobar, Stephen Hollingworth, Stephen M Baylor, Clara Franzini-Armstrong

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in The Journal of general physiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Extraocular muscle function is impaired inThe Journal of general physiology · 2019
    Article
  6. Review
  7. Review
  8. Article
  9. NO-sGC Pathway Modulates CaFrontiers in physiology · 2017
    Article
  10. Calsequestrins in skeletal and cardiac muscle from adult Danio rerio.Journal of muscle research and cell motility · 2016
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Stefano PerniDepartment of Cell and Developmental Biology and Department of Physiology, University of Pennsylvania School of Medicine, Philadelphia, PA 19104 stefano.perni@ucdenver.edu.
Kurt C MarsdenDepartment of Cell and Developmental Biology and Department of Physiology, University of Pennsylvania School of Medicine, Philadelphia, PA 19104.
Matias EscobarDepartment of Cell and Developmental Biology and Department of Physiology, University of Pennsylvania School of Medicine, Philadelphia, PA 19104.
Stephen HollingworthDepartment of Cell and Developmental Biology and Department of Physiology, University of Pennsylvania School of Medicine, Philadelphia, PA 19104.
Stephen M BaylorDepartment of Cell and Developmental Biology and Department of Physiology, University of Pennsylvania School of Medicine, Philadelphia, PA 19104.
Clara Franzini-ArmstrongDepartment of Cell and Developmental Biology and Department of Physiology, University of Pennsylvania School of Medicine, Philadelphia, PA 19104.
University of Pennsylvania · US

Funding

Uncovering the Molecular Basis of Malignant HyperthermiaP01AR052354 · NIAMS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI BEAM, KURT G · 2006 to 2016
$13.4M
CALCIUM RELEASE UNITS IN CARDIAC MUSCLER01HL048093 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI FRANZINI-ARMSTRONG, CLARA · 1993 to 2002
$644k
Genetic Analysis of Acoustic Startle Behavior and CircuitsF32NS077815 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI MARSDEN, KURT C. · 2011 to 2013
$101k
NHLBI NIH HHS R01 HL048093NHLBI NIH HHS R01 HL 48093NIAMS NIH HHS 2P01 AR052354NIAMS NIH HHS P01 AR052354NINDS NIH HHS 1F32NS077815-01NINDS NIH HHS F32 NS077815
6 · The paper itself

Abstract

The ryanodine receptor (RyR)1 isoform of the sarcoplasmic reticulum (SR) Ca(2+) release channel is an essential component of all skeletal muscle fibers. RyR1s are detectable as "junctional feet" (JF) in the gap between the SR and the plasmalemma or T-tubules, and they are required for excitation-contraction (EC) coupling and differentiation. A second isoform, RyR3, does not sustain EC coupling and differentiation in the absence of RyR1 and is expressed at highly variable levels. Anatomically, RyR3 expression correlates with the presence of parajunctional feet (PJF), which are located on the sides of the SR junctional cisternae in an arrangement found only in fibers expressing RyR3. In frog muscle fibers, the presence of RyR3 and PJF correlates with the occurrence of Ca(2+) sparks, which are elementary SR Ca(2+) release events of the EC coupling machinery. Here, we explored the structural and functional roles of RyR3 by injecting zebrafish (Danio rerio) one-cell stage embryos with a morpholino designed to specifically silence RyR3 expression. In zebrafish larvae at 72 h postfertilization, fast-twitch fibers from wild-type (WT) tail muscles had abundant PJF. Silencing resulted in a drop of the PJF/JF ratio, from 0.79 in WT fibers to 0.03 in the morphants. The frequency with which Ca(2+) sparks were detected dropped correspondingly, from 0.083 to 0.001 sarcomere(-1) s(-1). The few Ca(2+) sparks detected in morphant fibers were smaller in amplitude, duration, and spatial extent compared with those in WT fibers. Despite the almost complete disappearance of PJF and Ca(2+) sparks in morphant fibers, these fibers looked structurally normal and the swimming behavior of the larvae was not affected. This paper provides important evidence that RyR3 is the main constituent of the PJF and is the main contributor to the SR Ca(2+) flux underlying Ca(2+) sparks detected in fully differentiated frog and fish fibers.

Indexed as

Calcium SignalingAnimalsMuscle, SkeletalRyanodine Receptor Calcium Release ChannelZebrafishZebrafish ProteinsRyanodine Receptor Calcium Release ChannelZebrafish Proteins

Identifiers

PMID25667412
PMCPMC4338155
OpenAlexW4241578760

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.