Evidence map›Paper›PMID 25666423›Full record

ArticleBrain imaging and behavior2015

Interacting with the National Database for Autism Research (NDAR) via the LONI Pipeline workflow environment.

Carinna M Torgerson, Catherine Quinn, Ivo Dinov, Zhizhong Liu, Petros Petrosyan, Kevin Pelphrey, Christian Haselgrove, David N Kennedy, Arthur W Toga, John Darrell Van Horn

Abstract read
In one paragraph

Article in Brain imaging and behavior, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Carinna M TorgersonLaboratory of Neuro Imaging and The Institute for Neuroimaging and Informatics, Keck School of Medicine of USC, University of Southern California, 2001 North Soto Street - SSB1-Room 102, Los Angeles, CA, 90032, USA.
Catherine Quinn
Ivo Dinov
Zhizhong Liu
Petros Petrosyan
Kevin Pelphrey
Christian Haselgrove
David N Kennedy
Arthur W Toga
John Darrell Van Horn

Funding

Multimodal Developmental Neurogenetics of Females with ASDR01MH100028 · NIMH · YALE UNIVERSITY · PI Allison Elizabeth Jack, LAUREN KENWORTHY · 2012 to 2026
$37.8M
TISSUE CULTURE CORE FACILITYP30HD004147 · NICHD · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI MCILVANE, WILLIAM J · 1985 to 2014
$9.1M
Exposing the Deep Content of the Publication: Knowledge Extraction for Neuroimaging in Child PsychiatryR01MH083320 · NIMH · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI FRAZIER, JEAN A, KENNEDY, DAVID NELSON · 2009 to 2020
$6.3M
NICHD NIH HHS HD004147NICHD NIH HHS P30 HD004147NIMH NIH HHS 5R01MH100028-03NIMH NIH HHS MH083320NIMH NIH HHS R01 MH083320NIMH NIH HHS R01 MH100028
6 · The paper itself

Abstract

Under the umbrella of the National Database for Clinical Trials (NDCT) related to mental illnesses, the National Database for Autism Research (NDAR) seeks to gather, curate, and make openly available neuroimaging data from NIH-funded studies of autism spectrum disorder (ASD). NDAR has recently made its database accessible through the LONI Pipeline workflow design and execution environment to enable large-scale analyses of cortical architecture and function via local, cluster, or "cloud"-based computing resources. This presents a unique opportunity to overcome many of the customary limitations to fostering biomedical neuroimaging as a science of discovery. Providing open access to primary neuroimaging data, workflow methods, and high-performance computing will increase uniformity in data collection protocols, encourage greater reliability of published data, results replication, and broaden the range of researchers now able to perform larger studies than ever before. To illustrate the use of NDAR and LONI Pipeline for performing several commonly performed neuroimaging processing steps and analyses, this paper presents example workflows useful for ASD neuroimaging researchers seeking to begin using this valuable combination of online data and computational resources. We discuss the utility of such database and workflow processing interactivity as a motivation for the sharing of additional primary data in ASD research and elsewhere.

Indexed as

Databases, FactualAutism Spectrum DisorderCloud ComputingHumansInformation DisseminationInformation Storage and RetrievalNeuroimagingSoftwareWorkflow

Identifiers

PMID25666423
PMCPMC4447326

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.