Evidence map›Paper›PMID 25665573›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2015

Experimental analysis of hFACT action during Pol II transcription in vitro.

Fu-Kai Hsieh, Olga I Kulaeva, Vasily M Studitsky

Abstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Fu-Kai HsiehDepartment of Pharmacology, Rutgers University-Robert Wood Johnson Medical School, Piscataway, NJ, 08854, USA.
Olga I Kulaeva
Vasily M Studitsky
Johnson University · USLomonosov Moscow State University · RU

Funding

Mechanism Transcript Elongation in ChromatinR01GM058650 · NIGMS · WAYNE STATE UNIVERSITY · PI STUDITSKY, VASILY M · 1999 to 2015
$4.7M
NIGMS NIH HHS R01 GM058650NIGMS NIH HHS R01 GM58650
6 · The paper itself

Abstract

FACT (facilitates chromatin transcription) is a histone chaperone that facilitates transcription through chromatin and promotes histone recovery during transcription. Here, we describe a highly purified experimental system that recapitulates many important properties of transcribed chromatin and the key aspects of hFACT action during this process in vitro. We present the protocols describing how to prepare different forms of nucleosomes, including intact nucleosome, covalently conjugated nucleosome, nucleosome missing one of the two H2A/2B dimers (hexasome) and tetrasome (a nucleosome missing both H2A/2B dimers). These complexes allow analysis of various aspects of FACT's function. These approaches and other methods described below can also be applied to the study of other chromatin remodelers and chromatin-targeted factors.

Indexed as

ChromatinDNA-Binding ProteinsHigh Mobility Group ProteinsHistonesHumansNucleosomesOligonucleotidesPlasmidsRNA Polymerase IITranscriptional Elongation FactorsTranscription, GeneticChromatinDNA-Binding ProteinsHigh Mobility Group ProteinsHistonesNucleosomesOligonucleotidesRNA Polymerase IISSRP1 protein, humanTranscriptional Elongation Factors

Identifiers

PMID25665573
PMCPMC4966545
OpenAlexW2461425520

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.