Evidence map›Paper›PMID 25664460›Full record

ArticlePloS one2015

Comparative analysis of super-shedder strains of Escherichia coli O157:H7 reveals distinctive genomic features and a strongly aggregative adherent phenotype on bovine rectoanal junction squamous epithelial cells.

Rebecca Cote, Robab Katani, Matthew R Moreau, Indira T Kudva, Terrance M Arthur, Chitrita DebRoy, Michael M Mwangi, Istvan Albert, Juan Antonio Raygoza Garay, Lingling Li and 3 more

Open access · goldAbstract readComparative Study
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
3.9field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 33 citations in OpenAlex.

  1. Investigating the adherence factors ofMicrobiology spectrum · 2024
    Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Nonfimbrial Adhesin Mutants Reveal DivergentInternational journal of microbiology · 2021
    Article
  11. Genetic and Functional Analyses of Virulence Potential of anFrontiers in cellular and infection microbiology · 2020
    Article
  12. SupershedInternational journal of microbiology · 2020
    Article
  13. Circulation of Shiga Toxin-ProducingFrontiers in microbiology · 2020
    Article
  14. Review
  15. Conditional Function of Autoaggregative Protein Cah and CommonApplied and environmental microbiology · 2018
    Article
  16. Article
  17. Review
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 1 country.

Rebecca CoteDepartment of Veterinary and Biomedical Science, The Pennsylvania State University, University Park, Pennsylvania, United States of America; The Huck Institutes of the Life Sciences, The Pennsylvania State University, University Park, Pennsylvania, United States of America.
Robab KataniDepartment of Veterinary and Biomedical Science, The Pennsylvania State University, University Park, Pennsylvania, United States of America.
Matthew R MoreauDepartment of Veterinary and Biomedical Science, The Pennsylvania State University, University Park, Pennsylvania, United States of America.
Indira T KudvaFood Safety and Enteric Pathogens Research Unit, National Animal Disease Center, Agricultural Research Service, U.S. Department of Agriculture, Ames, Iowa, United States of America.
Terrance M ArthurRoman L. Hruska U.S. Meat Animal Research Center, Agricultural Research Service, U.S. Department of Agriculture, Clay Center, Nebraska, United States of America.
Chitrita DebRoyDepartment of Veterinary and Biomedical Science, The Pennsylvania State University, University Park, Pennsylvania, United States of America; E. coli Reference Center, The Pennsylvania State University, University Park, Pennsylvania, United States of America.
Michael M MwangiThe Huck Institutes of the Life Sciences, The Pennsylvania State University, University Park, Pennsylvania, United States of America; Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, Pennsylvania, United States of America.
Istvan AlbertThe Huck Institutes of the Life Sciences, The Pennsylvania State University, University Park, Pennsylvania, United States of America; Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, Pennsylvania, United States of America.
Juan Antonio Raygoza GarayDepartment of Veterinary and Biomedical Science, The Pennsylvania State University, University Park, Pennsylvania, United States of America; The Huck Institutes of the Life Sciences, The Pennsylvania State University, University Park, Pennsylvania, United States of America.
Lingling LiDepartment of Veterinary and Biomedical Science, The Pennsylvania State University, University Park, Pennsylvania, United States of America.
Maria T BrandlProduce Safety and Microbiology, Research Unit, Agriculture Research Service, U.S. Department of Agriculture, Albany, California, United States of America.
Michelle Q CarterProduce Safety and Microbiology, Research Unit, Agriculture Research Service, U.S. Department of Agriculture, Albany, California, United States of America.
Vivek KapurDepartment of Veterinary and Biomedical Science, The Pennsylvania State University, University Park, Pennsylvania, United States of America; The Huck Institutes of the Life Sciences, The Pennsylvania State University, University Park, Pennsylvania, United States of America.
Pennsylvania State University · USUnited States Department of Agriculture · USNational Animal Disease Center · USRoman L. Hruska U.S. Meat Animal Research Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Shiga toxin-producing Escherichia coli O157:H7 (O157) are significant foodborne pathogens and pose a serious threat to public health worldwide. The major reservoirs of O157 are asymptomatic cattle which harbor the organism in the terminal recto-anal junction (RAJ). Some colonized animals, referred to as "super-shedders" (SS), are known to shed O157 in exceptionally large numbers (>104 CFU/g of feces). Recent studies suggest that SS cattle play a major role in the prevalence and transmission of O157, but little is known about the molecular mechanisms associated with super-shedding. Whole genome sequence analysis of an SS O157 strain (SS17) revealed a genome of 5,523,849 bp chromosome with 5,430 open reading frames and two plasmids, pO157 and pSS17, of 94,645 bp and 37,446 bp, respectively. Comparative analyses showed that SS17 is clustered with spinach-associated O157 outbreak strains, and belongs to the lineage I/II, clade 8, D group, and genotype 1, a subgroup of O157 with predicted hyper-virulence. A large number of non-synonymous SNPs and other polymorphisms were identified in SS17 as compared with other O157 strains (EC4115, EDL933, Sakai, TW14359), including in key adherence- and virulence-related loci. Phenotypic analyses revealed a distinctive and strongly adherent aggregative phenotype of SS17 on bovine RAJ stratified squamous epithelial (RSE) cells that was conserved amongst other SS isolates. Molecular genetic and functional analyses of defined mutants of SS17 suggested that the strongly adherent aggregative phenotype amongst SS isolates is LEE-independent, and likely results from a novel mechanism. Taken together, our study provides a rational framework for investigating the molecular mechanisms associated with SS, and strong evidence that SS O157 isolates have distinctive features and use a LEE-independent mechanism for hyper-adherence to bovine rectal epithelial cells.

Indexed as

Genome, BacterialAnimalsBacterial AdhesionBacterial SheddingBase SequenceCattleEpithelial CellsEscherichia coli O157GenotypeIntestine, LargeMolecular Sequence DataPhenotypePlasmidsPolymorphism, GeneticRectumVirulence

Identifiers

PMID25664460
PMCPMC4321836
OpenAlexW2064456970

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.