Evidence map›Paper›PMID 25663846›Full record

ArticleNature photonics2015

Swept confocally-aligned planar excitation (SCAPE) microscopy for high speed volumetric imaging of behaving organisms.

Matthew B Bouchard, Venkatakaushik Voleti, César S Mendes, Clay Lacefield, Wesley B Grueber, Richard S Mann, Randy M Bruno, Elizabeth M C Hillman

Abstract read
In one paragraph

Article in Nature photonics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 312 papers.

0numbers the graph read from it
0cells of the map it votes in
312citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

312 citing papers in PubMed.

  1. Article
  2. Space-time light-sheet microscopy.Nature communications · 2026
    Article
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  6. Article
  7. Article
  8. Polarization-engineered aberration-resilient light sheet microscopy.bioRxiv : the preprint server for biology · 2026
    Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Correlative Imaging Platform Linking Taste Cell Function to Molecular Identity.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  19. Review
  20. Article

252 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Matthew B BouchardLaboratory for Functional Optical Imaging, Departments of Biomedical Engineering and Radiology, Columbia University, New York, NY 10027.
Venkatakaushik VoletiLaboratory for Functional Optical Imaging, Departments of Biomedical Engineering and Radiology, Columbia University, New York, NY 10027.
César S MendesMann Lab, Department of Biochemistry and Molecular Biophysics, Columbia University, New York, NY 10032.
Clay LacefieldBruno Lab, Department of Neuroscience, Columbia University, New York, NY 10032.
Wesley B GrueberDepartment of Physiology and Cellular Biophysics, Department of Neuroscience, College of Physicians and Surgeons, Columbia University Medical Center, New York, NY 10032.
Richard S MannMann Lab, Department of Biochemistry and Molecular Biophysics, Columbia University, New York, NY 10032.
Randy M BrunoBruno Lab, Department of Neuroscience, Columbia University, New York, NY 10032.
Elizabeth M C HillmanLaboratory for Functional Optical Imaging, Departments of Biomedical Engineering and Radiology, Columbia University, New York, NY 10027.

Funding

Development and Function of an Adult Locomotion Circuit in DrosophilaR01NS070644 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI MANN, RICHARD S · 2010 to 2024
$6.2M
Dendritic Patterning by Interacting Extrinsic CuesR01NS061908 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI GRUEBER, WESLEY B · 2008 to 2022
$5.2M
In-vivo optical imaging of neurovascular coupling and cerebral metabolismR01NS063226 · NINDS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI HILLMAN, ELIZABETH M. C. · 2008 to 2019
$3.5M
The Role of Dendrites in Thalamocortical CircuitryR01NS069679 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI SIEGELBAUM, STEVEN A · 2010 to 2020
$3.5M
Imaging the neuronal and metabolic basis of resting state connectivity mappingR01NS076628 · NINDS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI HILLMAN, ELIZABETH M. C. · 2011 to 2015
$1.7M
A Depth-resolved Voltage Sensitive Dye Imaging SystemR21NS053684 · NINDS · MASSACHUSETTS GENERAL HOSPITAL · PI HILLMAN, ELIZABETH M. C. · 2006 to 2007
$405k
NINDS NIH HHS R01 NS061908NINDS NIH HHS R01 NS063226NINDS NIH HHS R01 NS069679NINDS NIH HHS R01 NS070644NINDS NIH HHS R01 NS076628NINDS NIH HHS R21 NS053684
6 · The paper itself

Abstract

We report a new 3D microscopy technique that allows volumetric imaging of living samples at ultra-high speeds: Swept, confocally-aligned planar excitation (SCAPE) microscopy. While confocal and two-photon microscopy have revolutionized biomedical research, current implementations are costly, complex and limited in their ability to image 3D volumes at high speeds. Light-sheet microscopy techniques using two-objective, orthogonal illumination and detection require a highly constrained sample geometry, and either physical sample translation or complex synchronization of illumination and detection planes. In contrast, SCAPE microscopy acquires images using an angled, swept light-sheet in a single-objective, en-face geometry. Unique confocal descanning and image rotation optics map this moving plane onto a stationary high-speed camera, permitting completely translationless 3D imaging of intact samples at rates exceeding 20 volumes per second. We demonstrate SCAPE microscopy by imaging spontaneous neuronal firing in the intact brain of awake behaving mice, as well as freely moving transgenic

Identifiers

PMID25663846
PMCPMC4317333

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.