Evidence map›Paper›PMID 25662220›Full record

ArticleNucleic acids research2015

Nucleotide excision repair efficiency in quiescent human fibroblasts is modulated by circadian clock.

Leonardo Bee, Selena Marini, Giovanna Pontarin, Paola Ferraro, Rodolfo Costa, Urs Albrecht, Lucia Celotti

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Review
  6. Article
  7. Review
  8. The Clock Takes Shape-24 h Dynamics in Genome Topology.Frontiers in cell and developmental biology · 2021
    Review
  9. XPA: DNA Repair Protein of Significant Clinical Importance.International journal of molecular sciences · 2020
    Review
  10. Periodic Oxaliplatin Administration in Synergy with PER2-MediatedAdvanced science (Weinheim, Baden-Wurttemberg, Germany) · 2019
    Article
  11. Review
  12. Review
  13. Review
  14. Article
  15. Article
  16. Article
  17. The circadian coordination of cell biology.The Journal of cell biology · 2016
    Review
  18. Sirtuin-dependent clock control: new advances in metabolism, aging and cancer.Current opinion in clinical nutrition and metabolic care · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Leonardo BeeDepartment of Biology, University of Padova, Padova 35131, Italy.
Selena MariniDepartment of Biology, University of Padova, Padova 35131, Italy.
Giovanna PontarinDepartment of Biology, University of Padova, Padova 35131, Italy.
Paola FerraroDepartment of Biology, University of Padova, Padova 35131, Italy.
Rodolfo CostaDepartment of Biology, University of Padova, Padova 35131, Italy.
Urs AlbrechtDepartment of Biology, Unit for Biochemistry, University of Fribourg, Fribourg CH-1700, Switzerland.
Lucia CelottiDepartment of Biology, University of Padova, Padova 35131, Italy lucia.celotti@unipd.it.
University of Padua · ITUniversity of Fribourg · CH

Funding

Telethon GGP11011
6 · The paper itself

Abstract

The efficiency of Nucleotide Excision Repair (NER)process is crucial for maintaining genomic integrity because in many organisms, including humans, it represents the only system able to repair a wide range of DNA damage. The aim of the work was to investigate whether the efficiency of the repair of photoproducts induced by UV-light is affected by the circadian phase at which irradiation occurred. NER activity has been analyzed in human quiescent fibroblasts (in the absence of the cell cycle effect), in which circadian rhythmicity has been synchronized with a pulse of dexamethasone. Our results demonstrate that both DNA damage induction and repair efficiency are strictly dependent on the phase of the circadian rhythm at which the cells are UV-exposed. Furthermore, the differences observed between fibroblasts irradiated at different circadian times (CTs) are abolished when the clock is obliterated. In addition, we observe that chromatin structure is regulated by circadian rhythmicity. Maximal chromatin relaxation occurred at the same CT when photoproduct formation and removal were highest. Our data suggest that the circadian clock regulates both the DNA sensitivity to UV damage and the efficiency of NER by controlling chromatin condensation mainly through histone acetylation.

Indexed as

DNA RepairCell LineCells, CulturedChromatinCircadian ClocksDexamethasoneFibroblastsHumansPyrimidine DimersUltraviolet RaysXeroderma Pigmentosum Group A ProteinChromatinDexamethasonePyrimidine DimersXeroderma Pigmentosum Group A Protein

Identifiers

PMID25662220
PMCPMC4344517
OpenAlexW2143951943

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.