Evidence map›Paper›PMID 25659154›Full record

ArticlePloS one2015

ABCE1 is a highly conserved RNA silencing suppressor.

Kairi Kärblane, Jelena Gerassimenko, Lenne Nigul, Alla Piirsoo, Agata Smialowska, Kadri Vinkel, Per Kylsten, Karl Ekwall, Peter Swoboda, Erkki Truve and 1 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. ABCE Proteins: From Molecules to Development.Frontiers in plant science · 2018
    Review
  9. Review
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Kairi KärblaneDepartment of Gene Technology, Tallinn University of Technology, Tallinn, Estonia; Competence Centre for Cancer Research, Tallinn, Estonia.
Jelena GerassimenkoDepartment of Gene Technology, Tallinn University of Technology, Tallinn, Estonia; Competence Centre for Cancer Research, Tallinn, Estonia.
Lenne NigulDepartment of Gene Technology, Tallinn University of Technology, Tallinn, Estonia.
Alla PiirsooDepartment of Gene Technology, Tallinn University of Technology, Tallinn, Estonia.
Agata SmialowskaSchool of Life Sciences, Södertörn University College, S-14189, Huddinge, Sweden; Department of Biosciences and Nutrition, Karolinska Institute, S-14183, Huddinge, Sweden.
Kadri VinkelDepartment of Gene Technology, Tallinn University of Technology, Tallinn, Estonia.
Per KylstenSchool of Life Sciences, Södertörn University College, S-14189, Huddinge, Sweden.
Karl EkwallSchool of Life Sciences, Södertörn University College, S-14189, Huddinge, Sweden; Department of Biosciences and Nutrition, Karolinska Institute, S-14183, Huddinge, Sweden.
Peter SwobodaDepartment of Biosciences and Nutrition, Karolinska Institute, S-14183, Huddinge, Sweden.
Erkki TruveDepartment of Gene Technology, Tallinn University of Technology, Tallinn, Estonia; Competence Centre for Cancer Research, Tallinn, Estonia.
Cecilia SarmientoDepartment of Gene Technology, Tallinn University of Technology, Tallinn, Estonia; Competence Centre for Cancer Research, Tallinn, Estonia.
Tallinn University of Technology · EEVähiuuringute Tehnoloogia Arenduskeskus · EEKarolinska Institutet · SESödertörn University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

ATP-binding cassette sub-family E member 1 (ABCE1) is a highly conserved protein among eukaryotes and archaea. Recent studies have identified ABCE1 as a ribosome-recycling factor important for translation termination in mammalian cells, yeast and also archaea. Here we report another conserved function of ABCE1. We have previously described AtRLI2, the homolog of ABCE1 in the plant Arabidopsis thaliana, as an endogenous suppressor of RNA silencing. In this study we show that this function is conserved: human ABCE1 is able to suppress RNA silencing in Nicotiana benthamiana plants, in mammalian HEK293 cells and in the worm Caenorhabditis elegans. Using co-immunoprecipitation and mass spectrometry, we found a number of potential ABCE1-interacting proteins that might support its function as an endogenous suppressor of RNA interference. The interactor candidates are associated with epigenetic regulation, transcription, RNA processing and mRNA surveillance. In addition, one of the identified proteins is translin, which together with its binding partner TRAX supports RNA interference.

Indexed as

AnimalsATP-Binding Cassette TransportersCaenorhabditis elegansCaenorhabditis elegans ProteinsHEK293 CellsHumansNicotianaPeptide Chain Termination, TranslationalPlant ProteinsRNA InterferenceABCE1 protein, humanATP-Binding Cassette TransportersCaenorhabditis elegans ProteinsPlant Proteins

Identifiers

PMID25659154
PMCPMC4319951
OpenAlexW2094808103

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.