Evidence map›Paper›PMID 25659034›Full record

ArticleCell cycle (Georgetown, Tex.)2015

The contribution of CMP kinase to the efficiency of DNA repair.

Ning Tsao, Ming-Hsiang Lee, Wei Zhang, Yung-Chi Cheng, Zee-Fen Chang

Open access · bronzeAbstract read
In one paragraph

Article in Cell cycle (Georgetown, Tex.), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
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  4. Review
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  7. Interplays of mutations inFrontiers in cellular and infection microbiology · 2023
    Article
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  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 4 countries.

Ning Tsaoa Graduate Institute of Biochemistry and Molecular Biology; College of Medicine ; National Taiwan University ; Taipei , Taiwan (R.O.C.).
Ming-Hsiang Lee
Wei Zhang
Yung-Chi Cheng
Zee-Fen Chang
National Taiwan University · TWMacau University of Science and Technology · MONational Yang Ming University Hospital · TWYale University · US

Funding

BIOCHEMICAL PHARMACOLOGY OF ANTIHIV COMPOUNDSR01AI038204 · NIAID · YALE UNIVERSITY · PI CHENG, YUNG-CHI · 1995 to 2014
$5.2M
NIAID NIH HHS AI 38204NIAID NIH HHS R01 AI038204
6 · The paper itself

Abstract

Cellular supply of deoxynucleoside triphosphates (dNTPs) is crucial for DNA replication and repair. In this study, we investigated the role of CMP/UMP kinase (CMPK), an enzyme catalyzes CDP formation, in DNA repair. Knockdown of CMPK delays DNA repair during recovery from UV damage in serum-deprived cells but not in the cells without serum deprivation. Exogenous supply of cytidine or deoxycytidine facilitates DNA repair dependent on CMPK in serum-deprived cells, suggesting that the synthesis of dCDP or CDP determines the rate of repair. However, CMPK knockdown does not affect the steady state level of dCTP in serum-deprived cells. We then found the localization of CMPK at DNA damage sites and its complex formation with Tip60 and ribonucleotide reductase. Our analysis demonstrated that the N-terminal 32-amino-acid of CMPK is required for its recruitment to DNA damage sites in a Tip60-dependent manner. Re-expression of wild-type but not N-terminus deleted CMPK restores the efficiency of DNA repair in CMPK knockdown cells. We proposed that site-specific dCDP formation via CMPK provides a means to facilitate DNA repair in serum-deprived cells.

Indexed as

DNA RepairCulture Media, Serum-FreeCytidineDeoxycytosine NucleotidesDNA DamageGene Knockdown TechniquesHEK293 CellsHeLa CellsHumansMCF-7 CellsModels, BiologicalMultiprotein ComplexesNucleoside-Phosphate KinaseUltraviolet Rays2'-deoxycytidine 5'-triphosphateCulture Media, Serum-FreeCytidinecytidylate kinaseDeoxycytosine NucleotidesMultiprotein ComplexesNucleoside-Phosphate KinaseCMP/UMP kinaseDNA repairdNTPdNTP, deoxynucleoside triphosphates; CMPK, CMP/UMP kinase; RNR, ribonucleotide reductase; 6-4 pp, (6-4) photoproduct; R1C, C-terminal fragment of R1 subunit of RNRrecruitment to DNA damage sitesribonucleotide reductaseserum deprivationTip60UV irradiation

Identifiers

PMID25659034
PMCPMC4353248
OpenAlexW2035975883

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.