ArticleInternational journal of molecular sciences2015
Transcriptome profiling and identification of transcription factors in ramie (Boehmeria nivea L. Gaud) in response to PEG treatment, using illumina paired-end sequencing technology.
Article in International journal of molecular sciences, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.
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Who cites it
26 citing papers in PubMed, 45 citations in OpenAlex.
- Chloroplast genome characteristics and phylogenetic analysis of Ramie (Boehmeria nivea (L.) Gaudich).Molecular biology reports · 2026Article
- BnDREB1 confers cadmium tolerance in ramie.Scientific reports · 2025Article
- Effects of fermented ramie feed on the growth performance, serum biochemistry, metabolic capacity, antioxidant capacity, and intestinal health ofFrontiers in veterinary science · 2025Article
- Overexpression of a Ramie (Plants (Basel, Switzerland) · 2024Article
- Genome-Wide Identification and Expression Analysis ofInternational journal of molecular sciences · 2023Article
- QTL-seq and transcriptomic integrative analyses reveal two positively regulated genes that control the low-temperature germination ability of MTP-maize introgression lines.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023Article
- Integrating transcriptomics and metabolomics to analyze quinoa (Frontiers in plant science · 2022Article
- Improving Drought Stress Tolerance in Ramie (Frontiers in plant science · 2022Review
- Analysis of WRKY Resistance Gene Family inFrontiers in plant science · 2022Article
- Overexpression of CcNAC1 gene promotes early flowering and enhances drought tolerance of jute (Corchorus capsularis L.).Protoplasma · 2021Article
- Multi-Omics-Based Identification and Functional Characterization ofFrontiers in plant science · 2021Article
- Review
- Article
- Selection of Reference Genes for qPCR Analyses of Gene Expression in Ramie Leaves and Roots across Eleven Abiotic/Biotic Treatments.Scientific reports · 2019Article
- A genomic resource derived from the integration of genome sequences, expressed transcripts and genetic markers in ramie.BMC genomics · 2019Article
- Comparative transcriptomics reveals the selection patterns of domesticated ramie.Ecology and evolution · 2019Article
- Article
- Protein responses in kenaf plants exposed to drought conditions determined using iTRAQ technology.FEBS open bio · 2018Article
- Exploring transcription factors reveals crucial members and regulatory networks involved in different abiotic stresses in Brassica napus L.BMC plant biology · 2018Article
- Identification and expression characterization of the Phloem Protein 2 (PP2) genes in ramie (Boehmeria nivea L. Gaudich).Scientific reports · 2018Article
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Authors and funding
8 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Ramie (Boehmeria nivea L. Gaud), commonly known as China grass, is a perennial bast fiber plant of the Urticaceae. In China, ramie farming, industry, and trade provide income for about five million people. Drought stress severely affects ramie stem growth and causes a dramatic decrease in ramie fiber production. There is a need to enhance ramie's tolerance to drought stress. However, the drought stress regulatory mechanism in ramie remains unknown. Water stress imposed by polyethylene glycol (PEG) is a common and convenient method to evaluate plant drought tolerance. In this study, transcriptome analysis of cDNA collections from ramie subjected to PEG treatment was conducted using Illumina paired-end sequencing, which generated 170 million raw sequence reads. Between leaves and roots subjected to 24 (L2 and R2) and 72 (L3 and R3) h of PEG treatment, 16,798 genes were differentially expressed (9281 in leaves and 8627 in roots). Among these, 25 transcription factors (TFs) from the AP2 (3), MYB (6), NAC (9), zinc finger (5), and bZIP (2) families were considered to be associated with drought stress. The identified TFs could be used to further investigate drought adaptation in ramie.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.