Evidence map›Paper›PMID 25658355›Full record

ArticlePloS one2015

Proteolytic cleavage at twin arginine residues affects structural and functional transitions of lupin seed 11S storage globulin.

Jessica Capraro, Fabio Sessa, Chiara Magni, Alessio Scarafoni, Elisa Maffioli, Gabriella Tedeschi, Ron R D Croy, Marcello Duranti

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.8field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Jessica CapraroDepartment of Food, Environmental and Nutritional Sciences, Università degli Studi di Milano, Milan, Italy.
Fabio SessaDepartment of Food, Environmental and Nutritional Sciences, Università degli Studi di Milano, Milan, Italy.
Chiara MagniDepartment of Food, Environmental and Nutritional Sciences, Università degli Studi di Milano, Milan, Italy.
Alessio ScarafoniDepartment of Food, Environmental and Nutritional Sciences, Università degli Studi di Milano, Milan, Italy.
Elisa MaffioliDepartment of Veterinary Science and Public Health, Università degli Studi di Milano, Milan, Italy.
Gabriella TedeschiDepartment of Veterinary Science and Public Health, Università degli Studi di Milano, Milan, Italy.
Ron R D CroySchool of Biological and Biomedical Sciences, Durham University, Durham, United Kingdom.
Marcello DurantiDepartment of Food, Environmental and Nutritional Sciences, Università degli Studi di Milano, Milan, Italy.
University of Milan · ITDurham University · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The 11S storage globulin of white lupin seeds binds to a metal affinity chromatography matrix. Two unusual stretches of contiguous histidine residues, reminiscent of the multiple histidines forming metal binding motifs, at the C-terminal end of 11S globulin acidic chains were hypothesized as candidate elements responsible for the binding capacity. To prove this, the protein was incubated with a lupin seed endopeptidase previously shown to cleave at twin arginine motifs, recurrent in the sequence region of interest. Upon incubation with this enzyme, the loss of metal binding capacity paralleled that of the anti-his-tag reactive polypeptides. The recovered small proteolytic fragment was analyzed by mass spectrometry and N-terminal sequencing and found to correspond to the 24-mer region cleaved off at twin arginine residues and containing the natural his-tag-like region. Similarly, when lupin seeds were germinated for a few days, the his-tag containing 11S globulin chain was converted to a form devoid of such region, suggesting that this mechanism is a part of the natural degradatory process of the protein. The hypothesis that the ordered and controlled dismantling of storage proteins may generate peptide fragments with potential functional roles in plant ontogenesis is presented and discussed.

Indexed as

Amino Acid SequenceArginineGerminationGlobulinsLupinusModels, MolecularMolecular Sequence DataPlant ProteinsProteolysisSeedsArginineGlobulinsPlant Proteins

Identifiers

PMID25658355
PMCPMC4319833
OpenAlexW1978956845

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.