Evidence map›Paper›PMID 25658046›Full record

ArticleAmerican journal of human genetics2015

Mouse and human CRKL is dosage sensitive for cardiac outflow tract formation.

Silvia E Racedo, Donna M McDonald-McGinn, Jonathan H Chung, Elizabeth Goldmuntz, Elaine Zackai, Beverly S Emanuel, Bin Zhou, Birgit Funke, Bernice E Morrow

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed, 1 pooled it
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 1 synthesis or guideline pooled it, 72 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. Review
  6. Article
  7. Journal of the American Heart Association · 2023
    Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Crk adaptor proteins are necessary for the development of the zebrafish retina.Developmental dynamics : an official publication of the American Association of Anatomists · 2022
    Article
  14. Article
  15. Review
  16. Article
  17. Review
  18. Essential role of theLife science alliance · 2020
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 1 country.

Silvia E RacedoDepartment of Genetics, Albert Einstein College of Medicine, Yeshiva University, Bronx, NY 10461, USA.
Donna M McDonald-McGinnDivision of Genetics, Children's Hospital of Philadelphia, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.
Jonathan H ChungDepartment of Genetics, Albert Einstein College of Medicine, Yeshiva University, Bronx, NY 10461, USA.
Elizabeth GoldmuntzDivision of Cardiology, Children's Hospital of Philadelphia, Philadelphia, PA 19104, USA.
Elaine ZackaiDivision of Genetics, Children's Hospital of Philadelphia, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.
Beverly S EmanuelDivision of Genetics, Children's Hospital of Philadelphia, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.
Bin ZhouDepartment of Genetics, Albert Einstein College of Medicine, Yeshiva University, Bronx, NY 10461, USA.
Birgit FunkeLaboratory for Molecular Medicine, Partners HealthCare Center for Personalized Genetic Medicine, Cambridge, MA 02139, USA.
Bernice E MorrowDepartment of Genetics, Albert Einstein College of Medicine, Yeshiva University, Bronx, NY 10461, USA. Electronic address: bernice.morrow@einstein.yu.edu.
Albert Einstein College of Medicine · USChildren's Hospital of Philadelphia · USUniversity of Pennsylvania · USYeshiva University · USMass General Brigham · US

Funding

Project 2: Genetic Mechanisms of Non-syndromic Congenital Cardiac DefectsP01HD070454 · NICHD · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI MORROW, BERNICE E · 2011 to 2020
$14.0M
Genetic Modifiers for 22q 11.2 Deletion SyndromeR01HL084410 · NHLBI · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI MORROW, BERNICE E · 2007 to 2010
$3.3M
Molecular aspects of CRKL in heart development and human diseaseR01HL132577 · NHLBI · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI MORROW, BERNICE E, ZHOU, BIN · 2016 to 2019
$3.2M
NHLBI NIH HHS R01 HL084410NHLBI NIH HHS R01 HL132577NICHD NIH HHS P01 HD070454NICHD NIH HHS P01HD070454
6 · The paper itself

Abstract

The human chromosome 22q11.2 region is susceptible to rearrangements during meiosis leading to velo-cardio-facial/DiGeorge/22q11.2 deletion syndrome (22q11DS) characterized by conotruncal heart defects (CTDs) and other congenital anomalies. The majority of individuals have a 3 Mb deletion whose proximal region contains the presumed disease-associated gene TBX1 (T-box 1). Although a small subset have proximal nested deletions including TBX1, individuals with distal deletions that exclude TBX1 have also been identified. The deletions are flanked by low-copy repeats (LCR22A, B, C, D). We describe cardiac phenotypes in 25 individuals with atypical distal nested deletions within the 3 Mb region that do not include TBX1 including 20 with LCR22B to LCR22D deletions and 5 with nested LCR22C to LCR22D deletions. Together with previous reports, 12 of 37 (32%) with LCR22B-D deletions and 5 of 34 (15%) individuals with LCR22C-D deletions had CTDs including tetralogy of Fallot. In the absence of TBX1, we hypothesized that CRKL (Crk-like), mapping to the LCR22C-D region, might contribute to the cardiac phenotype in these individuals. We created an allelic series in mice of Crkl, including a hypomorphic allele, to test for gene expression effects on phenotype. We found that the spectrum of heart defects depends on Crkl expression, occurring with analogous malformations to that in human individuals, suggesting that haploinsufficiency of CRKL could be responsible for the etiology of CTDs in individuals with nested distal deletions and might act as a genetic modifier of individuals with the typical 3 Mb deletion.

Indexed as

PhenotypeAdaptor Proteins, Signal TransducingAnimalsChromosomes, Human, Pair 22EchocardiographyHeart Defects, CongenitalHumansIn Situ Hybridization, FluorescenceMiceNuclear ProteinsReal-Time Polymerase Chain ReactionSegmental Duplications, GenomicSequence DeletionAdaptor Proteins, Signal TransducingCRKL proteinNuclear Proteins

Identifiers

PMID25658046
PMCPMC4320261
OpenAlexW2111656859

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.