Evidence map›Paper›PMID 25657007›Full record

ArticleThe Journal of biological chemistry2015

Distinct mechanisms of recognizing endosomal sorting complex required for transport III (ESCRT-III) protein IST1 by different microtubule interacting and trafficking (MIT) domains.

Emily Z Guo, Zhaohui Xu

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed.

  1. Article
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  15. The Role of Spastin in Axon Biology.Frontiers in cell and developmental biology · 2022
    Review
  16. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Emily Z GuoFrom the Life Science Institute and.
Zhaohui XuFrom the Life Science Institute and Department of Biological Chemistry, Medical School, University of Michigan, Ann Arbor, Michigan 48109 zhaohui@umich.edu.

Funding

Structural Basis of Membrane Scission: Regulation of the Vps4 ATPase ComplexR01GM095769 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI XU, ZHAOHUI · 2011 to 2014
$1.2M
NIGMS NIH HHS GM095769NIGMS NIH HHS R01 GM095769
6 · The paper itself

Abstract

The endosomal sorting complex required for transport (ESCRT) machinery is responsible for membrane remodeling in a number of biological processes including multivesicular body biogenesis, cytokinesis, and enveloped virus budding. In mammalian cells, efficient abscission during cytokinesis requires proper function of the ESCRT-III protein IST1, which binds to the microtubule interacting and trafficking (MIT) domains of VPS4, LIP5, and Spartin via its C-terminal MIT-interacting motif (MIM). Here, we studied the molecular interactions between IST1 and the three MIT domain-containing proteins to understand the structural basis that governs pairwise MIT-MIM interaction. Crystal structures of the three molecular complexes revealed that IST1 binds to the MIT domains of VPS4, LIP5, and Spartin using two different mechanisms (MIM1 mode versus MIM3 mode). Structural comparison revealed that structural features in both MIT and MIM contribute to determine the specific binding mechanism. Within the IST1 MIM sequence, two phenylalanine residues were shown to be important in discriminating MIM1 versus MIM3 binding. These observations enabled us to deduce a preliminary binding code, which we applied to provide CHMP2A, a protein that normally only binds the MIT domain in the MIM1 mode, the additional ability to bind the MIT domain of Spartin in the MIM3 mode.

Indexed as

Adenosine TriphosphatasesAmino Acid SequenceATPases Associated with Diverse Cellular ActivitiesCell Cycle ProteinsCrystallography, X-RayEndosomal Sorting Complexes Required for TransportHumansHydrogen BondingModels, MolecularMolecular Sequence DataOncogene ProteinsProtein BindingProtein Interaction Domains and MotifsProteinsProtein Structure, QuaternaryProtein Structure, SecondaryAdenosine TriphosphatasesATPases Associated with Diverse Cellular ActivitiesCell Cycle ProteinsCHMP1B protein, humanEndosomal Sorting Complexes Required for TransportIST1 protein, humanOncogene ProteinsProteinsSPART protein, humanSpastinSPAST protein, humanVPS4B protein, humanVTA1 protein, humanCrystal StructureCytokinesisEndosomal Sorting Complexes Required for Transport (ESCRT)Hereditary Spastic ParaplegiasIST1LIP5Protein EngineeringProtein-Protein InteractionSpartinVPS4

Identifiers

PMID25657007
PMCPMC4375492

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.