Evidence map›Paper›PMID 25652746›Full record

ArticleThe Journal of antimicrobial chemotherapy2015

Low HIV-1 transmitted drug resistance in Bulgaria against a background of high clade diversity.

Ivailo Alexiev, Anupama Shankar, A M J Wensing, Danail Beshkov, Ivaylo Elenkov, Mariyana Stoycheva, Daniela Nikolova, Maria Nikolova, William M Switzer

Abstract read
In one paragraph

Article in The Journal of antimicrobial chemotherapy, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

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  13. Origin and spread of HIV-1 in persons who inject drugs in Bulgaria.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2016
    Article
  14. Observational
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Ivailo AlexievNational Reference Laboratory of HIV, National Center of Infectious and Parasitic Diseases, Sofia, Bulgaria ivoalexiev@yahoo.com.
Anupama ShankarDivision of HIV/AIDS Prevention, National Center for HIV/AIDS, Viral Hepatitis, STD, and TB Prevention, Centers for Disease Control and Prevention, Atlanta, GA, USA.
A M J WensingUniversity Medical Center Utrecht, Virology, Utrecht, The Netherlands.
Danail BeshkovNational Reference Laboratory of HIV, National Center of Infectious and Parasitic Diseases, Sofia, Bulgaria.
Ivaylo ElenkovHospital for Infectious and Parasitic Diseases, Sofia, Bulgaria.
Mariyana StoychevaDepartment of Infectious Diseases, Medical University, Plovdiv, Bulgaria.
Daniela NikolovaClinic of Infectious Diseases, Medical University, Varna, Bulgaria.
Maria NikolovaNational Reference Laboratory of Immunology, National Center of Infectious and Parasitic Diseases, Sofia, Bulgaria.
William M SwitzerDivision of HIV/AIDS Prevention, National Center for HIV/AIDS, Viral Hepatitis, STD, and TB Prevention, Centers for Disease Control and Prevention, Atlanta, GA, USA.

Funding

Intramural CDC HHS CC999999
6 · The paper itself

Abstract

objectivesTo determine transmitted drug resistance (TDR) and HIV-1 genetic diversity in Bulgaria.

methodsThe prevalence of TDR and HIV-1 subtypes was determined in 305/1446 (21.1%) persons newly diagnosed with HIV/AIDS from 1988 to 2011. TDR mutations (TDRMs) in protease and reverse transcriptase were defined using the WHO HIV drug mutation list. Phylogenetic analysis was used to infer polymerase (pol) genotype.

resultsTDRMs were found in 16/305 (5.2%) persons, 11 (3.6%) with resistance to NRTIs, 5 (1.6%) with resistance to NNRTIs and 3 (0.9%) with resistance to PIs. Dual-class TDRMs were found in three (1.0%) patients and one statistically supported cluster of TDRMs comprising two individuals with subtype B infection. TDRMs were found in 10 heterosexuals, 4 MSM and two intravenous drug users. Phylogenetic analyses identified high HIV-1 diversity consisting of mostly subtype B (44.6%), subtype C (3.3%), sub-subtype A1 (2.6%), sub-subtype F1 (2.3%), sub-subtype A-like (3.6%), subtype G (0.3%), CRF14_BG (1.6%), CRF05_DF (1.3%), CRF03_AB (0.3%) and unique recombinant forms (1.3%).

conclusionsWe found a low prevalence of TDR against a background of high HIV-1 genetic diversity among antiretroviral-naive patients in Bulgaria. Our results provide baseline data on TDR and support continued surveillance of high-risk populations in Bulgaria to better target treatment and prevention efforts.

Indexed as

Disease Transmission, InfectiousDrug Resistance, ViralGenetic VariationBulgariaFemaleHIV-1HIV InfectionsHIV ProteaseHIV Reverse TranscriptaseHumansMaleMolecular Sequence DataPhylogenyPrevalenceSequence Analysis, DNAHIV ProteaseHIV Reverse Transcriptasep16 protease, Human immunodeficiency virus 1reverse transcriptase, Human immunodeficiency virus 1antiretroviral mutationseastern Europesurveillanceviral heterogeneity

Identifiers

PMID25652746
PMCPMC11292601

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.