Evidence map›Paper›PMID 25650666›Full record

ArticleOncotarget2015

Trafficking protein particle complex 6A delta (TRAPPC6AΔ) is an extracellular plaque-forming protein in the brain.

Jean-Yun Chang, Ming-Hui Lee, Sing-Ru Lin, Li-Yi Yang, H Sunny Sun, Chun-I Sze, Qunying Hong, Yee-Shin Lin, Ying-Tsen Chou, Li-Jin Hsu and 3 more

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
4.9field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
  2. Article
  3. Zfra Overrides WWOX in Suppressing the Progression of Neurodegeneration.International journal of molecular sciences · 2024
    Review
  4. Article
  5. Review
  6. Zfra Inhibits the TRAPPC6AΔ-Initiated Pathway of Neurodegeneration.International journal of molecular sciences · 2022
    Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Review
  12. Review
  13. Article
  14. TheExperimental biology and medicine (Maywood, N.J.) · 2020
    Review
  15. Article
  16. Article
  17. Article
  18. Frontiers in cell and developmental biology · 2020
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 3 countries.

Jean-Yun ChangInstitute of Molecular Medicine, National Cheng Kung University Medical College, Tainan, Taiwan, ROC.
Ming-Hui LeeInstitute of Molecular Medicine, National Cheng Kung University Medical College, Tainan, Taiwan, ROC.
Sing-Ru LinInstitute of Molecular Medicine, National Cheng Kung University Medical College, Tainan, Taiwan, ROC.
Li-Yi YangInstitute of Molecular Medicine, National Cheng Kung University Medical College, Tainan, Taiwan, ROC.
H Sunny SunInstitute of Molecular Medicine, National Cheng Kung University Medical College, Tainan, Taiwan, ROC.
Chun-I SzeDepartments of Anatomy and Cell Biology, National Cheng Kung University Medical College, Tainan, Taiwan, ROC.
Qunying HongDepartment of Pulmonary Medicine, Zhongshan Hospital, Fudan University, Shanghai, ROC.
Yee-Shin LinDepartment of Microbiology and Immunology, National Cheng Kung University Medical College, Tainan, Taiwan, ROC.
Ying-Tsen ChouInstitute of Basic Medical Sciences, National Cheng Kung University Medical College, Tainan, Taiwan, ROC.
Li-Jin HsuDepartment of Microbiology and Immunology, National Cheng Kung University Medical College, Tainan, Taiwan, ROC.
Ming-Shiou JanAdvanced Optoelectronic Technology Center, National Cheng Kung University, Tainan, Taiwan, ROC.
Cheng-Xin GongInstitute of Microbiology and Immunology, Chung Shan Medical University, Taichung, Taiwan, ROC.
Nan-Shan ChangInstitute of Molecular Medicine, National Cheng Kung University Medical College, Tainan, Taiwan, ROC.
National Cheng Kung University · TWChung Shan Medical University · TWFudan University · CNNew York State Office for People With Developmental Disabilities · US

Funding

IMPROVEMENT AND APPLICATIONS OF FUNCTIONAL MRIR01EB002009 · NIBIB · EMORY UNIVERSITY · PI HU, XIAOPING P · 2003 to 2008
$2.3M
NIBIB NIH HHS R01 EB002009
6 · The paper itself

Abstract

Tumor suppressor WWOX is involved in the progression of cancer and neurodegeneration. Here, we examined whether protein aggregation occurs in the brain of nondemented, middle-aged humans and whether this is associated with WWOX downregulation. We isolated an N-terminal internal deletion isoform, TPC6AΔ, derived from alternative splicing of the TRAPPC6A (TPC6A) gene transcript. TPC6AΔ proteins are present as aggregates or plaques in the extracellular matrix of the brain such as in the cortex. Filter retardation assays revealed that aggregate formation of TPC6AΔ occurs preceding Aβ generation in the hippocampi of middle-aged postmortem normal humans. In a Wwox gene knockout mouse model, we showed the plaques of pT181-Tau and TPC6AΔ in the cortex and hippocampus in 3-week-old mice, suggesting a role of WWOX in limiting TPC6AΔ aggregation. To support this hypothesis, in vitro analysis revealed that TGF-β1 induces dissociation of the ectopic complex of TPC6AΔ and WWOX in cells, and then TPC6AΔ undergoes Ser35 phosphorylation-dependent polymerization and induces caspase 3 activation and Aβ production. Similarly, knockdown of WWOX by siRNA resulted in dramatic aggregation of TPC6AΔ. Together, when WWOX is downregulated, TPC6AΔ is phosphorylated at Ser35 and becomes aggregated for causing caspase activation that leads to Tau aggregation and Aβ formation.

Indexed as

AgedAged, 80 and overAlzheimer DiseaseAmino Acid SequenceAnimalsBrainCell Line, TumorCell MovementChlorocebus aethiopsCOS CellsHumansMiceMice, KnockoutMiddle AgedMolecular Sequence DataOxidoreductasesOxidoreductasesProtein IsoformsTRAPPC6A protein, mouseTumor Suppressor ProteinsVesicular Transport ProteinsWW Domain-Containing OxidoreductaseWWOX protein, humanWwox protein, mouse

Identifiers

PMID25650666
PMCPMC4414138
OpenAlexW1485476021

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.