Evidence map›Paper›PMID 25649381›Full record

ArticleEuropean journal of human genetics : EJHG2015

A detailed clinical and molecular survey of subjects with nonsyndromic USH2A retinopathy reveals an allelic hierarchy of disease-causing variants.

Eva Lenassi, Ajoy Vincent, Zheng Li, Zubin Saihan, Alison J Coffey, Heather B Steele-Stallard, Anthony T Moore, Karen P Steel, Linda M Luxon, Elise Héon and 2 more

Open access · hybridAbstract read
In one paragraph

Article in European journal of human genetics : EJHG, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 85 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
85citing papers in PubMed, 1 pooled it
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

85 citing papers in PubMed, 1 synthesis or guideline pooled it, 120 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Review
  6. USH2A-Mutated Human Retinal Organoids Model Rod-Cone Dystrophy.Investigative ophthalmology & visual science · 2025
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. A Comparative Evaluation of the Genetic Variant Spectrum in theInternational journal of molecular sciences · 2024
    Article
  14. Article
  15. The British journal of ophthalmology · 2024
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. HGG advances · 2023
    Article

25 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 4 countries.

Eva LenassiUCL Institute of Ophthalmology and Moorfields Eye Hospital, University College of London, London, UK.
Ajoy VincentThe Hospital for Sick Children, Department of Ophthalmology and Vision Sciences, University of Toronto, Toronto, ON, Canada.ORCID http://orcid.org/0000-0001-6446-3846
Zheng LiUCL Institute of Ophthalmology and Moorfields Eye Hospital, University College of London, London, UK.
Zubin SaihanUCL Institute of Ophthalmology and Moorfields Eye Hospital, University College of London, London, UK.
Alison J CoffeyWellcome Trust Sanger Institute, Hinxton, UK.
Heather B Steele-StallardUCL Institute of Child Health, London, UK.
Anthony T MooreUCL Institute of Ophthalmology and Moorfields Eye Hospital, University College of London, London, UK.
Karen P SteelWellcome Trust Sanger Institute, Hinxton, UK.
Linda M LuxonUCL Ear Institute, London, UK.
Elise HéonThe Hospital for Sick Children, Department of Ophthalmology and Vision Sciences, University of Toronto, Toronto, ON, Canada.
Maria Bitner-GlindziczUCL Institute of Child Health, London, UK.
Andrew R WebsterUCL Institute of Ophthalmology and Moorfields Eye Hospital, University College of London, London, UK.
Moorfields Eye Hospital NHS Foundation Trust · GBUniversity College London · GBUniversity of Toronto · CAWellcome Sanger Institute · GBNational Hospital for Neurology and Neurosurgery · GB

Funding

Medical Research Council G0300212Medical Research Council MC_QA137918Wellcome TrustWellcome Trust 098051
6 · The paper itself

Abstract

Defects in USH2A cause both isolated retinal disease and Usher syndrome (ie, retinal disease and deafness). To gain insights into isolated/nonsyndromic USH2A retinopathy, we screened USH2A in 186 probands with recessive retinal disease and no hearing complaint in childhood (discovery cohort) and in 84 probands with recessive retinal disease (replication cohort). Detailed phenotyping, including retinal imaging and audiological assessment, was performed in individuals with two likely disease-causing USH2A variants. Further genetic testing, including screening for a deep-intronic disease-causing variant and large deletions/duplications, was performed in those with one likely disease-causing change. Overall, 23 of 186 probands (discovery cohort) were found to harbour two likely disease-causing variants in USH2A. Some of these variants were predominantly associated with nonsyndromic retinal degeneration ('retinal disease-specific'); these included the common c.2276 G>T, p.(Cys759Phe) mutation and five additional variants: c.2802 T>G, p.(Cys934Trp); c.10073 G>A, p.(Cys3358Tyr); c.11156 G>A, p.(Arg3719His); c.12295-3 T>A; and c.12575 G>A, p.(Arg4192His). An allelic hierarchy was observed in the discovery cohort and confirmed in the replication cohort. In nonsyndromic USH2A disease, retinopathy was consistent with retinitis pigmentosa and the audiological phenotype was variable. USH2A retinopathy is a common cause of nonsyndromic recessive retinal degeneration and has a different mutational spectrum to that observed in Usher syndrome. The following model is proposed: the presence of at least one 'retinal disease-specific' USH2A allele in a patient with USH2A-related disease results in the preservation of normal hearing. Careful genotype-phenotype studies such as this will become increasingly important, especially now that high-throughput sequencing is widely used in the clinical setting.

Indexed as

AdultAgedAllelesDNA Mutational AnalysisExonsExtracellular Matrix ProteinsFemaleGenetic TestingGenotypeHumansIntronsMaleMiddle AgedMutationPedigreePhenotypeExtracellular Matrix ProteinsUSH2A protein, human

Identifiers

PMID25649381
PMCPMC4592079
OpenAlexW2081734811

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.