Evidence map›Paper›PMID 25648321›Full record

ArticleInternational journal of molecular sciences2015

Genetic variants in the apoptosis gene BCL2L1 improve response to interferon-based treatment of hepatitis C virus genotype 3 infection.

Louise Nygaard Clausen, Nina Weis, Steen Ladelund, Lone Madsen, Suzanne Lunding, Britta Tarp, Peer Brehm Christensen, Henrik Bygum Krarup, Axel Møller, Jan Gerstoft and 3 more

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 7 institutions in 1 country.

Louise Nygaard ClausenDepartment of Infectious Diseases, Copenhagen University Hospital, 2650 Hvidovre, Denmark. louisenygaardclausen@gmail.com.
Nina WeisDepartment of Infectious Diseases, Copenhagen University Hospital, 2650 Hvidovre, Denmark. ninaweis@dadlnet.dk.
Steen LadelundClinical Research Centre, Copenhagen University Hospital, 2650 Hvidovre, Denmark. steen.ladelund.01@regionh.dk.
Lone MadsenDepartment of Gastroenterology, Køge Hospital, 4600 Køge, Denmark. logm@regionsjaelland.dk.
Suzanne LundingDepartment of Infectious Diseases, Hillerød Hospital, 3400 Hillerød, Denmark. lunding@dadlnet.dk.
Britta TarpDiagnostic Center, Silkeborg Regional Hospital, 8600 Silkeborg, Denmark. brittarp@rm.dk.
Peer Brehm ChristensenDepartment of Infectious Diseases, Odense University Hospital, 5230 Odense, Denmark. peer.christensen@dadlnet.dk.
Henrik Bygum KrarupDepartment of Gastroenterology and Department of Clinical Biochemistry, Section for Molecular Diagnostics, Aalborg University Hospital, 9100 Aalborg, Denmark. h.krarup@rn.dk.
Axel MøllerDepartment of Medicine, Kolding Regional Hospital, 6000 Kolding, Denmark. Axel.Moeller@slb.regionsyddanmark.dk.
Jan GerstoftDepartment of Infectious Diseases and Rheumatology, Copenhagen University Hospital, Rigshospitalet, 2100 Copenhagen, Denmark. jan.gerstoft@rh.regionh.dk.
Mette Rye ClausenDepartment of Hepatology, Copenhagen University Hospital, Rigshospitalet, 2100 Copenhagen, Denmark. steen.ladelund.01@regionh.dk.
Thomas BenfieldDepartment of Infectious Diseases, Copenhagen University Hospital, 2650 Hvidovre, Denmark. steen.ladelund.01@regionh.dk.
DANHEP group
Copenhagen University Hospital · DKUniversity of Copenhagen · DKAalborg University Hospital · DKKolding Hospital · DKOdense University Hospital · DKRegionshospitalet Silkeborg · DKZealand University Hospital Køge · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genetic variation upstream of the apoptosis pathway has been associated with outcome of hepatitis C virus (HCV) infection. We investigated genetic polymorphisms in the intrinsic apoptosis pathway to assess their influence on sustained virological response (SVR) to pegylated interferon-α and ribavirin (pegIFN/RBV) treatment of HCV genotypes 1 and 3 infections. We conducted a candidate gene association study in a prospective cohort of 201 chronic HCV-infected individuals undergoing treatment with pegIFN/RBV. Differences between groups were compared in logistic regression adjusted for age, HCV viral load and interleukin 28B genotypes. Four single nucleotide polymorphisms (SNPs) located in the B-cell lymphoma 2-like 1 (BCL2L1) gene were significantly associated with SVR. SVR rates were significantly higher for carriers of the beneficial rs1484994 CC genotypes. In multivariate logistic regression, the rs1484994 SNP combined CC+TC genotypes were associated with a 3.4 higher odds ratio (OR) in SVR for the HCV genotype 3 (p=0.02). The effect estimate was similar for genotype 1, but the association did not reach statistical significance. In conclusion, anti-apoptotic SNPs in the BCL2L1 gene were predictive of SVR to pegIFN/RBV treatment in HCV genotypes 1 and 3 infected individuals. These SNPs may be used in prediction of SVR, but further studies are needed.

Indexed as

Genetic VariationAdultAllelesAntiviral AgentsApoptosisbcl-X ProteinDrug Therapy, CombinationFemaleGenotypeHepacivirusHepatitis CHumansInterferonsMaleMiddle AgedPolymorphism, Single NucleotideAntiviral Agentsbcl-X ProteinInterferons

Identifiers

PMID25648321
PMCPMC4346890
OpenAlexW2044994650

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.