Evidence map›Paper›PMID 25648249›Full record

ArticleBMC biochemistry2015

Identification of fragments from Autographa californica polyhedrin protein essential for self-aggregation and exogenous protein incorporation.

Alicia Sampieri, Agustín Luz-Madrigal, Jesus Zepeda, Luis Vaca

Open access · hybridAbstract read
In one paragraph

Article in BMC biochemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Alicia SampieriInstituto de Fisiología Celular, Universidad Nacional Autónoma de México, Ciudad Universitaria, México, DF, 04510, México. asampier@ifc.unam.mx.
Agustín Luz-MadrigalDepartment of Biology and Center for Tissue Regeneration and Engineering, University of Dayton (TREND), Dayton, OH, USA. madrigal@miamioh.edu.
Jesus ZepedaInstituto de Fisiología Celular, Universidad Nacional Autónoma de México, Ciudad Universitaria, México, DF, 04510, México. mvzchuy@gmail.com.
Luis VacaInstituto de Fisiología Celular, Universidad Nacional Autónoma de México, Ciudad Universitaria, México, DF, 04510, México. lvaca@ifc.unam.mx.
Universidad Nacional Autónoma de México · MXUniversity of Dayton · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundBaculoviruses are widely used for the production of recombinant proteins, biopesticides and as gene delivery systems. One of the viral forms called polyhedra has been recently exploited as a scaffold system to incorporate or encapsulate foreign proteins or peptide fragments. However, an efficient strategy for foreign protein incorporation has not been thoroughly studied.

resultsBased on the crystal structure of polyhedrin, we conducted an in silico analysis of the baculovirus Autographa californica nucleopolyhedrovirus (AcMNPV) polyhedrin protein to select the minimum fragments of polyhedrin that could be incorporated into polyhedra. Using confocal and transmission electron microscopy we analyzed the expression and cellular localization of the different polyhedrin fragments fused to the green fluorescent protein (EGFP) used as reporter. The amino fragment 1-110 contains two repeats formed each of two β sheets followed by a α helix (amino acids 1-58 and 58-110) that are important for the formation and stability of polyhedra. These fragments 1-58, 58-110 and 1-110 could be incorporated into polyhedra. However, only fragments 1-110 and 58-110 can self-aggregate.

conclusionsThese results demonstrate that 58-110 is the minimum fragment that contributes to the assembly of the recombinant polyhedra via self-aggregation. This is the minimum sequence that can be used to efficiently incorporate foreign proteins into polyhedra.

Indexed as

Computational BiologyProtein AggregatesAnimalsCytoplasmGreen Fluorescent ProteinsNucleopolyhedrovirusesOcclusion Body Matrix ProteinsRecombinant Fusion ProteinsSf9 CellsSpodopteraViral Structural Proteinsenhanced green fluorescent proteinGreen Fluorescent ProteinsOcclusion Body Matrix Proteinspolyhedrin protein, NucleopolyhedrovirusProtein AggregatesRecombinant Fusion ProteinsViral Structural Proteins

Identifiers

PMID25648249
PMCPMC4320575
OpenAlexW2054361078

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.