Evidence map›Paper›PMID 25648224›Full record

ArticleBMC microbiology2015

Identification of ferredoxin II as a major calcium binding protein in the nitrogen-fixing symbiotic bacterium Mesorhizobium loti.

Roberto Moscatiello, Mattia Zaccarin, Flavia Ercolin, Ernesto Damiani, Andrea Squartini, Antonella Roveri, Lorella Navazio

Open access · goldAbstract read
In one paragraph

Article in BMC microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.5field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 9 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Roberto MoscatielloDepartment of Biology, University of Padova, Via U. Bassi 58/B, 35131, Padova, Italy. roberto.moscatiello@unipd.it.
Mattia ZaccarinDepartment of Molecular Medicine, University of Padova, Viale G. Colombo 3, 35131, Padova, Italy. mattia.zaccarin@unipd.it.
Flavia ErcolinDepartment of Biology, University of Padova, Via U. Bassi 58/B, 35131, Padova, Italy. flavia.ercolin@gmail.com.
Ernesto DamianiDepartment of Biomedical Sciences, University of Padova, Viale G. Colombo 3, 35131, Padova, Italy. ernesto.damiani@unipd.it.
Andrea SquartiniDepartment of Agronomy, Food, Natural Resources, Animals and Environment, DAFNAE, University of Padova, Viale dell'Università 16, 35020, Legnaro, Padova, Italy. squart@unipd.it.
Antonella RoveriDepartment of Molecular Medicine, University of Padova, Viale G. Colombo 3, 35131, Padova, Italy. antonella.roveri@unipd.it.
Lorella NavazioDepartment of Biology, University of Padova, Via U. Bassi 58/B, 35131, Padova, Italy. lorella.navazio@unipd.it.
University of Padua · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundLegumes establish with rhizobial bacteria a nitrogen-fixing symbiosis which is of the utmost importance for both plant nutrition and a sustainable agriculture. Calcium is known to act as a key intracellular messenger in the perception of symbiotic signals by both the host plant and the microbial partner. Regulation of intracellular free Ca(2+) concentration, which is a fundamental prerequisite for any Ca(2+)-based signalling system, is accomplished by complex mechanisms including Ca(2+) binding proteins acting as Ca(2+) buffers. In this work we investigated the occurrence of Ca(2+) binding proteins in Mesorhizobium loti, the specific symbiotic partner of the model legume Lotus japonicus.

resultsA soluble, low molecular weight protein was found to share several biochemical features with the eukaryotic Ca(2+)-binding proteins calsequestrin and calreticulin, such as Stains-all blue staining on SDS-PAGE, an acidic isoelectric point and a Ca(2+)-dependent shift of electrophoretic mobility. The protein was purified to homogeneity by an ammonium sulfate precipitation procedure followed by anion-exchange chromatography on DEAE-Cellulose and electroendosmotic preparative electrophoresis. The Ca(2+) binding ability of the M. loti protein was demonstrated by (45)Ca(2+)-overlay assays. ESI-Q-TOF MS/MS analyses of the peptides generated after digestion with either trypsin or endoproteinase AspN identified the rhizobial protein as ferredoxin II and confirmed the presence of Ca(2+) adducts.

conclusionsThe present data indicate that ferredoxin II is a major Ca(2+) binding protein in M. loti that may participate in Ca(2+) homeostasis and suggest an evolutionarily ancient origin for protein-based Ca(2+) regulatory systems.

Indexed as

CalciumCalcium-Binding ProteinsChemical PrecipitationChromatography, Ion ExchangeElectrophoresisFerredoxinsIsoelectric PointMesorhizobiumNitrogen FixationSpectrometry, Mass, Electrospray IonizationTandem Mass SpectrometryCalciumCalcium-Binding ProteinsFerredoxins

Identifiers

PMID25648224
PMCPMC4322793
OpenAlexW2133749664

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.