Evidence map›Paper›PMID 25647637›Full record

ArticleeLife2015

Integrated β-catenin, BMP, PTEN, and Notch signalling patterns the nephron.

Nils O Lindström, Melanie L Lawrence, Sally F Burn, Jeanette A Johansson, Elvira R M Bakker, Rachel A Ridgway, C-Hong Chang, Michele J Karolak, Leif Oxburgh, Denis J Headon and 4 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 76 papers.

0numbers the graph read from it
0cells of the map it votes in
76citing papers in PubMed
7.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

76 citing papers in PubMed, 133 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Cell-cell crosstalk in kidney health and disease.Nature reviews. Nephrology · 2026
    Review
  6. Dissecting Normal and Abnormal Human Kidney Development Using Multiomics.Journal of the American Society of Nephrology : JASN · 2026
    Review
  7. Split Developmental Origin of the Loop of Henle.Journal of the American Society of Nephrology : JASN · 2025
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Measurement of adhesion and traction of cells at high yield reveals an energetic ratchet operating during nephron condensation.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  14. Article
  15. Article
  16. Article
  17. 3D Hydrogel Encapsulation Regulates Nephrogenesis in Kidney Organoids.Advanced materials (Deerfield Beach, Fla.) · 2024
    Article
  18. Article
  19. Article
  20. Article

16 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 3 countries.

Nils O LindströmDivision of Developmental Biology, The Roslin Institute, University of Edinburgh, Easter Bush, United Kingdom.
Melanie L LawrenceCentre for Integrated Physiology, University of Edinburgh, Edinburgh, United Kingdom.
Sally F BurnDepartment of Genetics and Development, Columbia University, New York, United States.
Jeanette A JohanssonDivision of Developmental Biology, The Roslin Institute, University of Edinburgh, Easter Bush, United Kingdom.
Elvira R M BakkerLaboratory of Gastroenterology and Hepatology, Erasmus MC, University Medical Centre, Rotterdam, Netherlands.
Rachel A RidgwayDepartment of Invasion and Metastasis, Cancer Research UK Beatson Institute, Glasgow, United Kingdom.
C-Hong ChangCentre for Integrated Physiology, University of Edinburgh, Edinburgh, United Kingdom.
Michele J KarolakCenter for Molecular Medicine, Maine Medical Center Research Institute, Scarborough, United States.
Leif OxburghCenter for Molecular Medicine, Maine Medical Center Research Institute, Scarborough, United States.
Denis J HeadonDivision of Developmental Biology, The Roslin Institute, University of Edinburgh, Easter Bush, United Kingdom.
Owen J SansomBeatston Institute for Cancer Research, Glasgow, United Kingdom.
Ron SmitsLaboratory of Gastroenterology and Hepatology, Erasmus MC, University Medical Centre, Rotterdam, Netherlands.
Jamie A DaviesCentre for Integrated Physiology, University of Edinburgh, Edinburgh, United Kingdom.
Peter HohensteinDivision of Developmental Biology, The Roslin Institute, University of Edinburgh, Easter Bush, United Kingdom.
Roslin Institute · GBUniversity of Edinburgh · GBCancer Research UK Scotland Institute · GBErasmus MC · NLMaine Medical Center Research Institute · USColumbia University · US

Funding

Biotechnology and Biological Sciences Research Council BB/J003416/1Cancer Research UK 12481Medical Research Council MR/K010735/1National Centre for the Replacement, Refinement and Reduction of Animals in Research NC/K500549/1
6 · The paper itself

Abstract

The different segments of the nephron and glomerulus in the kidney balance the processes of water homeostasis, solute recovery, blood filtration, and metabolite excretion. When segment function is disrupted, a range of pathological features are presented. Little is known about nephron patterning during embryogenesis. In this study, we demonstrate that the early nephron is patterned by a gradient in β-catenin activity along the axis of the nephron tubule. By modifying β-catenin activity, we force cells within nephrons to differentiate according to the imposed β-catenin activity level, thereby causing spatial shifts in nephron segments. The β-catenin signalling gradient interacts with the BMP pathway which, through PTEN/PI3K/AKT signalling, antagonises β-catenin activity and promotes segment identities associated with low β-catenin activity. β-catenin activity and PI3K signalling also integrate with Notch signalling to control segmentation: modulating β-catenin activity or PI3K rescues segment identities normally lost by inhibition of Notch. Our data therefore identifies a molecular network for nephron patterning.

Indexed as

Animalsbeta CateninBody PatterningBone Morphogenetic ProteinsCell DifferentiationDiffusion Chambers, CultureEmbryo, MammalianEpithelial CellsGene Expression Regulation, DevelopmentalMiceMice, TransgenicNephronsOrgan Culture TechniquesPhosphatidylinositol 3-KinasesProto-Oncogene Proteins c-aktPTEN Phosphohydrolasebeta CateninBone Morphogenetic ProteinsCTNNB1 protein, mousePhosphatidylinositol 3-KinasesProto-Oncogene Proteins c-aktPTEN PhosphohydrolasePten protein, mouseReceptors, NotchRNA, Small Interferingbeta-cateninBMPdevelopmental biologykidney developmentmouseNotchpatterningPI3Kstem cells

Identifiers

PMID25647637
PMCPMC4337611
OpenAlexW2078758440

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.