Evidence map›Paper›PMID 25646814›Full record

ArticlePLoS pathogens2015

A specific A/T polymorphism in Western tyrosine phosphorylation B-motifs regulates Helicobacter pylori CagA epithelial cell interactions.

Xue-Song Zhang, Nicole Tegtmeyer, Leah Traube, Shawn Jindal, Guillermo Perez-Perez, Heinrich Sticht, Steffen Backert, Martin J Blaser

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
10.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 87 citations in OpenAlex.

  1. Host andGut microbes · 2026
    Article
  2. Microbiology and molecular biology reviews : MMBR · 2026
    Review
  3. Article
  4. Article
  5. Comments on 'Genotypic diversity of theJournal of medical microbiology · 2025
    Article
  6. Review
  7. Article
  8. Review
  9. Impact of the Helicobacter pylori Oncoprotein CagA in Gastric Carcinogenesis.Current topics in microbiology and immunology · 2023
    Article
  10. A review of signal pathway induced by virulent protein CagA ofFrontiers in cellular and infection microbiology · 2023
    Review
  11. Article
  12. Article
  13. Article
  14. International journal of molecular sciences · 2020
    Review
  15. Genetic variation in the cag pathogenicity island of Helicobacter pylori strains detected from gastroduodenal patients in Thailand.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2020
    Article
  16. Article
  17. Inhibitory Effects of β-Caryophyllene onInternational journal of molecular sciences · 2020
    Article
  18. Presence ofJournal of medical microbiology · 2020
    Article
  19. Review
  20. Four Chromosomal Type IV Secretion Systems inFrontiers in microbiology · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Xue-Song ZhangDepartments of Medicine and Microbiology, New York University School of Medicine and VA Medical Center, New York, New York, United States of America.
Nicole TegtmeyerFriedrich Alexander University Erlangen, Department of Biology, Division of Microbiology, Erlangen, Germany.
Leah TraubeDepartments of Medicine and Microbiology, New York University School of Medicine and VA Medical Center, New York, New York, United States of America.
Shawn JindalDepartments of Medicine and Microbiology, New York University School of Medicine and VA Medical Center, New York, New York, United States of America.
Guillermo Perez-PerezDepartments of Medicine and Microbiology, New York University School of Medicine and VA Medical Center, New York, New York, United States of America.
Heinrich StichtFriedrich Alexander University Erlangen, Bioinformatics, Institute for Biochemistry, Erlangen, Germany.
Steffen BackertFriedrich Alexander University Erlangen, Department of Biology, Division of Microbiology, Erlangen, Germany.
Martin J BlaserDepartments of Medicine and Microbiology, New York University School of Medicine and VA Medical Center, New York, New York, United States of America.
New York University · USFriedrich-Alexander-Universität Erlangen-Nürnberg · DE

Funding

MATHEMATICAL MODELS OF H PYLORI GASTRIC COLONIZATIONR01GM063270 · NIGMS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI BLASER, MARTIN J · 2000 to 2013
$3.1M
NIGMS NIH HHS R01 GM063270NIGMS NIH HHS R01GM63270
6 · The paper itself

Abstract

Helicobacter pylori persistently colonizes the human stomach, with mixed roles in human health. The CagA protein, a key host-interaction factor, is translocated by a type IV secretion system into host epithelial cells, where its EPIYA tyrosine phosphorylation motifs (TPMs) are recognized by host cell kinases, leading to multiple host cell signaling cascades. The CagA TPMs have been described as type A, B, C or D, each with a specific conserved amino acid sequence surrounding EPIYA. Database searching revealed strong non-random distribution of the B-motifs (including EPIYA and EPIYT) in Western H. pylori isolates. In silico analysis of Western H. pylori CagA sequences provided evidence that the EPIYT B-TPMs are significantly less associated with gastric cancer than the EPIYA B-TPMs. By generating and using a phosphorylated CagA B-TPM-specific antibody, we demonstrated the phosphorylated state of the CagA B-TPM EPIYT during H. pylori co-culture with host cells. We also showed that within host cells, CagA interaction with phosphoinositol 3-kinase (PI3-kinase) was B-TPM tyrosine-phosphorylation-dependent, and the recombinant CagA with EPIYT B-TPM had higher affinity to PI3-kinase and enhanced induction of AKT than the isogenic CagA with EPIYA B-TPM. Structural modeling of the CagA B-TPM motif bound to PI3-kinase indicated that the threonine residue at the pY+1 position forms a side-chain hydrogen bond to N-417 of PI3-kinase, which cannot be formed by alanine. During co-culture with AGS cells, an H. pylori strain with a CagA EPIYT B-TPM had significantly attenuated induction of interleukin-8 and hummingbird phenotype, compared to the isogenic strain with B-TPM EPIYA. These results suggest that the A/T polymorphisms could regulate CagA activity through interfering with host signaling pathways related to carcinogenesis, thus influencing cancer risk.

Indexed as

Polymorphism, Single NucleotideAmino Acid MotifsAntigens, BacterialBacterial ProteinsCell LineCoculture TechniquesEpithelial CellsHelicobacter pyloriHost-Pathogen InteractionsHumansImmunoblottingImmunoprecipitationPhosphorylationAntigens, BacterialBacterial ProteinscagA protein, Helicobacter pylori

Identifiers

PMID25646814
PMCPMC4412286
OpenAlexW1993925968

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.