Evidence map›Paper›PMID 25646482›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

Thioredoxin, a master regulator of the tricarboxylic acid cycle in plant mitochondria.

Danilo M Daloso, Karolin Müller, Toshihiro Obata, Alexandra Florian, Takayuki Tohge, Alexandra Bottcher, Christophe Riondet, Laetitia Bariat, Fernando Carrari, Adriano Nunes-Nesi and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 74 papers.

0numbers the graph read from it
0cells of the map it votes in
74citing papers in PubMed
9.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

74 citing papers in PubMed, 233 citations in OpenAlex.

  1. Trial
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  3. Review
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  7. Article
  8. Review
  9. Redox dynamics in seeds ofFrontiers in plant science · 2024
    Article
  10. Review
  11. Comparative Analysis of the Complete Mitochondrial Genomes ofInternational journal of molecular sciences · 2023
    Article
  12. Review
  13. Article
  14. Article
  15. Assembly of the Complete Mitochondrial Genome ofInternational journal of molecular sciences · 2023
    Article
  16. Article
  17. Article
  18. Evaluation of GC/MS-BasedMetabolites · 2023
    Article
  19. Article
  20. Article

14 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 7 institutions in 5 countries.

Danilo M DalosoMax-Planck-Institut für Molekulare Pflanzenphysiologie,14476 Potsdam-Golm, Germany; Max Planck Partner Group at the Departamento de Biologia Vegetal, Universidade Federal de Viçosa, 36570-900 Viçosa, MG, Brazil;
Karolin MüllerMax-Planck-Institut für Molekulare Pflanzenphysiologie,14476 Potsdam-Golm, Germany;
Toshihiro ObataMax-Planck-Institut für Molekulare Pflanzenphysiologie,14476 Potsdam-Golm, Germany;
Alexandra FlorianMax-Planck-Institut für Molekulare Pflanzenphysiologie,14476 Potsdam-Golm, Germany;
Takayuki TohgeMax-Planck-Institut für Molekulare Pflanzenphysiologie,14476 Potsdam-Golm, Germany;
Alexandra BottcherMax-Planck-Institut für Molekulare Pflanzenphysiologie,14476 Potsdam-Golm, Germany;
Christophe RiondetLaboratoire Génome et Développement des Plantes, Unité Mixte de Recherche 5096, Centre National de la Recherche Scientifique, Université de Perpignan Via Domitia, 66860 Perpignan, France;
Laetitia BariatLaboratoire Génome et Développement des Plantes, Unité Mixte de Recherche 5096, Centre National de la Recherche Scientifique, Université de Perpignan Via Domitia, 66860 Perpignan, France;
Fernando CarrariInstituto de Biotecnología, Instituto Nacional de Tecnología Agrícola, Consejo Nacional de Investigaciones Científicas y Técnicas, B1712WAA Castelar, Argentina; and.
Adriano Nunes-NesiMax Planck Partner Group at the Departamento de Biologia Vegetal, Universidade Federal de Viçosa, 36570-900 Viçosa, MG, Brazil;
Bob B BuchananDepartment of Plant and Microbial Biology, University of California, Berkeley, CA 94720 view@berkeley.edu jpr@univ-perp.fr wlaraujo@ufv.br fernie@mpimp-golm.mpg.de.
Jean-Philippe ReichheldLaboratoire Génome et Développement des Plantes, Unité Mixte de Recherche 5096, Centre National de la Recherche Scientifique, Université de Perpignan Via Domitia, 66860 Perpignan, France; view@berkeley.edu jpr@univ-perp.fr wlaraujo@ufv.br fernie@mpimp-golm.mpg.de.
Wagner L AraújoMax Planck Partner Group at the Departamento de Biologia Vegetal, Universidade Federal de Viçosa, 36570-900 Viçosa, MG, Brazil; view@berkeley.edu jpr@univ-perp.fr wlaraujo@ufv.br fernie@mpimp-golm.mpg.de.
Alisdair R FernieMax-Planck-Institut für Molekulare Pflanzenphysiologie,14476 Potsdam-Golm, Germany; view@berkeley.edu jpr@univ-perp.fr wlaraujo@ufv.br fernie@mpimp-golm.mpg.de.
Max Planck Institute of Molecular Plant Physiology · DEUniversidade Federal de Viçosa · BRCentre National de la Recherche Scientifique · FRLaboratoire Génome et Développement des Plantes · FRNational Institute of Industrial Technology · ARUniversité de Perpignan · FRUniversity of California, Berkeley · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plant mitochondria have a fully operational tricarboxylic acid (TCA) cycle that plays a central role in generating ATP and providing carbon skeletons for a range of biosynthetic processes in both heterotrophic and photosynthetic tissues. The cycle enzyme-encoding genes have been well characterized in terms of transcriptional and effector-mediated regulation and have also been subjected to reverse genetic analysis. However, despite this wealth of attention, a central question remains unanswered: "What regulates flux through this pathway in vivo?" Previous proteomic experiments with Arabidopsis discussed below have revealed that a number of mitochondrial enzymes, including members of the TCA cycle and affiliated pathways, harbor thioredoxin (TRX)-binding sites and are potentially redox-regulated. We have followed up on this possibility and found TRX to be a redox-sensitive mediator of TCA cycle flux. In this investigation, we first characterized, at the enzyme and metabolite levels, mutants of the mitochondrial TRX pathway in Arabidopsis: the NADP-TRX reductase a and b double mutant (ntra ntrb) and the mitochondrially located thioredoxin o1 (trxo1) mutant. These studies were followed by a comparative evaluation of the redistribution of isotopes when (13)C-glucose, (13)C-malate, or (13)C-pyruvate was provided as a substrate to leaves of mutant or WT plants. In a complementary approach, we evaluated the in vitro activities of a range of TCA cycle and associated enzymes under varying redox states. The combined dataset suggests that TRX may deactivate both mitochondrial succinate dehydrogenase and fumarase and activate the cytosolic ATP-citrate lyase in vivo, acting as a direct regulator of carbon flow through the TCA cycle and providing a mechanism for the coordination of cellular function.

Indexed as

Citric Acid CycleArabidopsisCarbon IsotopesCitratesGenes, PlantGenetic Complementation TestMetabolomicsMitochondriaModels, BiologicalMutationPlant LeavesPlant RootsPlastidsReproducibility of ResultsSeedsThioredoxinsCarbon IsotopesCitratesThioredoxinsArabidopsisATP-citrate lyasecitric acid cycle regulationredox regulationthioredoxin TCA cycle regulation

Identifiers

PMID25646482
PMCPMC4371975
OpenAlexW1981519837

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.