Evidence map›Paper›PMID 25646413›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

TCL1 targeting miR-3676 is codeleted with tumor protein p53 in chronic lymphocytic leukemia.

Veronica Balatti, Lara Rizzotto, Cecelia Miller, Alexey Palamarchuk, Paolo Fadda, Rosantony Pandolfo, Laura Z Rassenti, Erin Hertlein, Amy S Ruppert, Arletta Lozanski and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed, 72 citations in OpenAlex.

  1. Trial
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  5. The Roles of tRNA-Derived Fragments in Cancer: Updates and Perspectives.International journal of molecular sciences · 2025
    Review
  6. Review
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  8. Roles and regulation of tRNA-derived small RNAs in animals.Nature reviews. Molecular cell biology · 2024
    Review
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  11. Article
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  16. tRNA-derived fragments (tRFs) in cancer.Journal of cell communication and signaling · 2023
    Review
  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 2 countries.

Veronica BalattiDepartment of Molecular Virology, Immunology and Medical Genetics, and.
Lara RizzottoDepartment of Molecular Virology, Immunology and Medical Genetics, and.
Cecelia MillerDivision of Hematology, The Ohio State University Comprehensive Cancer Center, Columbus, OH 43210;
Alexey PalamarchukDepartment of Molecular Virology, Immunology and Medical Genetics, and.
Paolo FaddaDepartment of Molecular Virology, Immunology and Medical Genetics, and.
Rosantony PandolfoDepartment of Molecular Virology, Immunology and Medical Genetics, and Department of Health Sciences, University "Magna Grecia" of Catanzaro, Catanzaro 88100, Italy; and.
Laura Z RassentiDepartment of Medicine, University of California, San Diego, La Jolla, CA 92093.
Erin HertleinDivision of Hematology, The Ohio State University Comprehensive Cancer Center, Columbus, OH 43210;
Amy S RuppertDivision of Hematology, The Ohio State University Comprehensive Cancer Center, Columbus, OH 43210;
Arletta LozanskiDivision of Hematology, The Ohio State University Comprehensive Cancer Center, Columbus, OH 43210;
Gerard LozanskiDivision of Hematology, The Ohio State University Comprehensive Cancer Center, Columbus, OH 43210;
Thomas J KippsDepartment of Medicine, University of California, San Diego, La Jolla, CA 92093.
John C ByrdDivision of Hematology, The Ohio State University Comprehensive Cancer Center, Columbus, OH 43210;
Carlo M CroceDepartment of Molecular Virology, Immunology and Medical Genetics, and carlo.croce@osumc.edu pekarsky.yuri@osumc.edu.
Yuri PekarskyDepartment of Molecular Virology, Immunology and Medical Genetics, and carlo.croce@osumc.edu pekarsky.yuri@osumc.edu.
The Ohio State University · USUniversity of California, San Diego · USMagna Graecia University · IT

Funding

Tissue CoreP01CA081534 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI KIPPS, THOMAS J · 2000 to 2016
$59.5M
SPORE Leukemia Tissue BankP50CA140158 · NCI · OHIO STATE UNIVERSITY · PI BLOOMFIELD, CLARA D · 2009 to 2013
$11.2M
Integrative Training in Biomedical SystemsT32GM068412 · NIGMS · OHIO STATE UNIVERSITY · PI PARVIN, JEFFREY D · 2005 to 2020
$2.4M
TOWARD AN UNDERSTANDING OF CLL PROGRESSIONR01CA151319 · NCI · OHIO STATE UNIVERSITY · PI CROCE, CARLO M · 2011 to 2015
$1.5M
NCI NIH HHS P01 CA081534NCI NIH HHS P50 CA140158NCI NIH HHS R01 CA151319NIGMS NIH HHS T32 GM068412NIGMS NIH HHS T32GM068412
6 · The paper itself

Abstract

B-cell chronic lymphocytic leukemia (CLL) is the most common human leukemia and dysregulation of the T-cell leukemia/lymphoma 1 (TCL1) oncogene is a contributing event in the pathogenesis of the aggressive form of this disease based on transgenic mouse studies. To determine a role of microRNAs on the pathogenesis of the aggressive form of CLL we studied regulation of TCL1 expression in CLL by microRNAs. We identified miR-3676 as a regulator of TCL1 expression. We demonstrated that miR-3676 targets three consecutive 28-bp repeats within 3'UTR of TCL1 and showed that miR-3676 is a powerful inhibitor of TCL1. We further showed that miR-3676 expression is significantly down-regulated in four groups of CLL carrying the 11q deletions, 13q deletions, 17p deletions, or a normal karyotype compared with normal CD19(+) cord blood and peripheral blood B cells. In addition, the sequencing of 539 CLL samples revealed five germ-line mutations in six samples (1%) in miR-3676. Two of these mutations were loss-of-function mutations. Because miR-3676 is located at 17p13, only 500-kb centromeric of tumor protein p53 (Tp53), and is codeleted with Tp53, we propose that loss of miR-3676 causes high levels of TCL1 expression contributing to CLL progression.

Indexed as

Gene DeletionHumansLeukemia, Lymphocytic, Chronic, B-CellMicroRNAsProto-Oncogene ProteinsTumor Suppressor Protein p53MicroRNAsProto-Oncogene ProteinsTCL1A protein, humanTP53 protein, humanTumor Suppressor Protein p5317p deletionsCLLmiR-3676

Identifiers

PMID25646413
PMCPMC4343115
OpenAlexW2032200822

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.