Evidence map›Paper›PMID 25646085›Full record

ArticleThe Journal of cell biology2015

Structural basis for assembly and function of the Nup82 complex in the nuclear pore scaffold.

Monika Gaik, Dirk Flemming, Alexander von Appen, Panagiotis Kastritis, Norbert Mücke, Jessica Fischer, Philipp Stelter, Alessandro Ori, Khanh Huy Bui, Jochen Baßler and 3 more

Abstract read
In one paragraph

Article in The Journal of cell biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed.

  1. Review
  2. Article
  3. Structure, function and assembly of nuclear pore complexes.Nature reviews. Molecular cell biology · 2026
    Review
  4. Review
  5. Article
  6. Review
  7. Article
  8. Advances in the understanding of nuclear pore complexes in human diseases.Journal of cancer research and clinical oncology · 2024
    Review
  9. The Molecular Architecture of the Nuclear Basket.bioRxiv : the preprint server for biology · 2024
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Monika GaikBiochemistry Center of Heidelberg University, D-69120 Heidelberg, Germany.
Dirk FlemmingBiochemistry Center of Heidelberg University, D-69120 Heidelberg, Germany.
Alexander von AppenStructural and Computational Biology Unit, European Molecular Biology Laboratory, D-69117 Heidelberg, Germany.
Panagiotis KastritisStructural and Computational Biology Unit, European Molecular Biology Laboratory, D-69117 Heidelberg, Germany.
Norbert MückeDivision of Biophysics of Macromolecules, German Center Research Center, D-69120 Heidelberg, Germany.
Jessica FischerBiochemistry Center of Heidelberg University, D-69120 Heidelberg, Germany.
Philipp StelterBiochemistry Center of Heidelberg University, D-69120 Heidelberg, Germany.
Alessandro OriStructural and Computational Biology Unit, European Molecular Biology Laboratory, D-69117 Heidelberg, Germany.
Khanh Huy BuiStructural and Computational Biology Unit, European Molecular Biology Laboratory, D-69117 Heidelberg, Germany.
Jochen BaßlerBiochemistry Center of Heidelberg University, D-69120 Heidelberg, Germany.
Elisar BarbarDepartment of Biochemistry and Biophysics, Oregon State University, Corvallis, OR 97331.
Martin BeckStructural and Computational Biology Unit, European Molecular Biology Laboratory, D-69117 Heidelberg, Germany ed.hurt@bzh.uni-heidelberg.de martin.beck@embl.de.
Ed HurtBiochemistry Center of Heidelberg University, D-69120 Heidelberg, Germany ed.hurt@bzh.uni-heidelberg.de martin.beck@embl.de.

Funding

Dynein light chain as a dimerization hub for natively disordered proteinsR01GM084276 · NIGMS · OREGON STATE UNIVERSITY · PI BARBAR, ELISAR J · 2009 to 2013
$1.5M
European Research Council 309271NIGMS NIH HHS GM 084276NIGMS NIH HHS R01 GM084276
6 · The paper itself

Abstract

Nuclear pore complexes (NPCs) are huge assemblies formed from ∼30 different nucleoporins, typically organized in subcomplexes. One module, the conserved Nup82 complex at the cytoplasmic face of NPCs, is crucial to terminate mRNA export. To gain insight into the structure, assembly, and function of the cytoplasmic pore filaments, we reconstituted in yeast the Nup82-Nup159-Nsp1-Dyn2 complex, which was suitable for biochemical, biophysical, and electron microscopy analyses. Our integrative approach revealed that the yeast Nup82 complex forms an unusual asymmetric structure with a dimeric array of subunits. Based on all these data, we developed a three-dimensional structural model of the Nup82 complex that depicts how this module might be anchored to the NPC scaffold and concomitantly can interact with the soluble nucleocytoplasmic transport machinery.

Indexed as

Amino Acid SequenceMicroscopy, ElectronModels, MolecularMolecular Sequence DataNuclear PoreNuclear Pore Complex ProteinsProtein Interaction Domains and MotifsProtein Structure, QuaternarySaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsNuclear Pore Complex ProteinsNUP82 protein, S cerevisiaeSaccharomyces cerevisiae Proteins

Identifiers

PMID25646085
PMCPMC4315244

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.