Evidence map›Paper›PMID 25645933›Full record

ArticleMolecular & cellular proteomics : MCP2015

Total proteome analysis identifies migration defects as a major pathogenetic factor in immunoglobulin heavy chain variable region (IGHV)-unmutated chronic lymphocytic leukemia.

Gina L Eagle, Jianguo Zhuang, Rosalind E Jenkins, Kathleen J Till, Puthen V Jithesh, Ke Lin, Gillian G Johnson, Melanie Oates, Kevin Park, Neil R Kitteringham and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Molecular & cellular proteomics : MCP, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
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  4. Kinobead Profiling Reveals Reprogramming of BCR Signaling in Response to Therapy within Primary CLL Cells.Clinical cancer research : an official journal of the American Association for Cancer Research · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Gina L EagleFrom the ‡Department of Molecular and Clinical Cancer Medicine.
Jianguo ZhuangFrom the ‡Department of Molecular and Clinical Cancer Medicine, j.zhuang@liverpool.ac.uk.
Rosalind E Jenkins§MRC Centre for Drug Safety Science, Department of Molecular and Clinical Pharmacology, University of Liverpool, Liverpool L69 3GA, UK;
Kathleen J TillFrom the ‡Department of Molecular and Clinical Cancer Medicine.
Puthen V JitheshFrom the ‡Department of Molecular and Clinical Cancer Medicine.
Ke Lin¶Royal Liverpool and Broadgreen University Hospitals NHS Trust, Liverpool L7 8XP, UK.
Gillian G Johnson¶Royal Liverpool and Broadgreen University Hospitals NHS Trust, Liverpool L7 8XP, UK.
Melanie OatesFrom the ‡Department of Molecular and Clinical Cancer Medicine.
Kevin Park§MRC Centre for Drug Safety Science, Department of Molecular and Clinical Pharmacology, University of Liverpool, Liverpool L69 3GA, UK;
Neil R Kitteringham§MRC Centre for Drug Safety Science, Department of Molecular and Clinical Pharmacology, University of Liverpool, Liverpool L69 3GA, UK;
Andrew R PettittFrom the ‡Department of Molecular and Clinical Cancer Medicine, ¶Royal Liverpool and Broadgreen University Hospitals NHS Trust, Liverpool L7 8XP, UK a.r.pettitt@liverpool.ac.uk.
Royal Liverpool and Broadgreen University Hospital NHS Trust · GBUniversity of Liverpool · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The mutational status of the immunoglobulin heavy chain variable region defines two clinically distinct forms of chronic lymphocytic leukemia (CLL) known as mutated (M-CLL) and unmutated (UM-CLL). To elucidate the molecular mechanisms underlying the adverse clinical outcome associated with UM-CLL, total proteomes from nine UM-CLL and nine M-CLL samples were analyzed by isobaric tags for relative and absolute quantification (iTRAQ)-based mass spectrometry. Based on the expression of 3521 identified proteins, principal component analysis separated CLL samples into two groups corresponding to immunoglobulin heavy chain variable region mutational status. Computational analysis showed that 43 cell migration/adhesion pathways were significantly enriched by 39 differentially expressed proteins, 35 of which were expressed at significantly lower levels in UM-CLL samples. Furthermore, UM-CLL cells underexpressed proteins associated with cytoskeletal remodeling and overexpressed proteins associated with transcriptional and translational activity. Taken together, our findings indicate that UM-CLL cells are less migratory and more adhesive than M-CLL cells, resulting in their retention in lymph nodes, where they are exposed to proliferative stimuli. In keeping with this hypothesis, analysis of an extended cohort of 120 CLL patients revealed a strong and specific association between UM-CLL and lymphadenopathy. Our study illustrates the potential of total proteome analysis to elucidate pathogenetic mechanisms in cancer.

Indexed as

Cell MovementAgedBlotting, WesternCell Line, TumorChemokine CCL21ChemotaxisComputational BiologyFemaleHumansImmunoglobulin Heavy ChainsImmunoglobulin Variable RegionIsotope LabelingLeukemia, Lymphocytic, Chronic, B-CellLymphatic DiseasesMaleMass SpectrometryChemokine CCL21Immunoglobulin Heavy ChainsImmunoglobulin Variable RegionNeoplasm ProteinsProteome

Identifiers

PMID25645933
PMCPMC4390271
OpenAlexW2114566045

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.