Evidence map›Paper›PMID 25645453›Full record

ArticleScientific reports2015

Systematic confirmation study of GWAS-identified genetic variants for Kawasaki disease in a Chinese population.

Jiao Lou, Rong Zhong, Na Shen, Xu-zai Lu, Jun-tao Ke, Jia-yu Duan, Yan-qi Qi, Yu-jia Wang, Qing Zhang, Wei Wang and 2 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
2.7field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it, 41 citations in OpenAlex.

  1. Pooled it
  2. TheBioMed research international · 2018
    Trial
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Combined Single Nucleotide Variants ofChildren (Basel, Switzerland) · 2021
    Article
  10. Epigenetics in Kawasaki Disease.Frontiers in pediatrics · 2021
    Review
  11. Immunogenetics of Kawasaki disease.Clinical reviews in allergy & immunology · 2020
    Review
  12. Article
  13. Antibodies and Immunity During Kawasaki Disease.Frontiers in cardiovascular medicine · 2020
    Review
  14. Article
  15. Article
  16. Review
  17. Review
  18. The rs1625579 T>G polymorphism in theInfection and drug resistance · 2018
    Article
  19. Article
  20. Dissecting Kawasaki disease: a state-of-the-art review.European journal of pediatrics · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 2 countries.

Jiao LouDepartment of Epidemiology and Biostatistics and Key Laboratory of Environment and Health, Ministry of Education &Ministry of Environmental Protection, and State Key Laboratory of Environmental Health (Incubating), School of Public Health, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, PR China.
Rong ZhongDepartment of Epidemiology and Biostatistics and Key Laboratory of Environment and Health, Ministry of Education &Ministry of Environmental Protection, and State Key Laboratory of Environmental Health (Incubating), School of Public Health, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, PR China.
Na ShenDepartment of Epidemiology and Biostatistics and Key Laboratory of Environment and Health, Ministry of Education &Ministry of Environmental Protection, and State Key Laboratory of Environmental Health (Incubating), School of Public Health, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, PR China.
Xu-zai LuGuangdong Women and Children Hospital, Guangzhou, PR China.
Jun-tao KeDepartment of Epidemiology and Biostatistics and Key Laboratory of Environment and Health, Ministry of Education &Ministry of Environmental Protection, and State Key Laboratory of Environmental Health (Incubating), School of Public Health, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, PR China.
Jia-yu DuanDepartment of Epidemiology and Biostatistics and Key Laboratory of Environment and Health, Ministry of Education &Ministry of Environmental Protection, and State Key Laboratory of Environmental Health (Incubating), School of Public Health, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, PR China.
Yan-qi QiChildren's Hospital, Zhejiang University School of Medicine, Hangzhou, PR China.
Yu-jia WangCentre Hospitalier de l'Université de Montréal, CRCHUM-Hôpital Notre-Dame, Pavillion DeSève, Montreal, Canada.
Qing ZhangChildren's Hospital, Zhejiang University School of Medicine, Hangzhou, PR China.
Wei WangChildren's Hospital, Zhejiang University School of Medicine, Hangzhou, PR China.
Fang-qi GongChildren's Hospital, Zhejiang University School of Medicine, Hangzhou, PR China.
Xiao-ping MiaoDepartment of Epidemiology and Biostatistics and Key Laboratory of Environment and Health, Ministry of Education &Ministry of Environmental Protection, and State Key Laboratory of Environmental Health (Incubating), School of Public Health, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, PR China.
Guangdong Province Women and Children Hospital · CNHôpital Notre-Dame · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genome-wide association studies (GWASs) have identified multiple single nucleotide polymorphisms (SNPs) associated with Kawasaki disease (KD). In this study, we replicated the associations of 10 GWAS-identified SNPs with KD in a Han Chinese population. Odds ratios (ORs) and 95% confidence intervals (CIs) were calculated by logistic regression, and cumulative effect of non-risk genotypes were also performed. Although none of the SNPs reached the corrected significance level, 4 SNPs showed nominal associations with KD risk. Compared with their respective wild type counterparts, rs1801274 AG+GG genotypes and rs3818298 TC+CC genotypes were nominally associated with the reduced risk of KD (OR = 0.77, 95% CI = 0.59-0.99, P = 0.045; OR = 0.74, 95% CI = 0.56-0.98, P = 0.038). Meanwhile, rs1801274 GG genotype, rs2736340 CC genotype or rs4813003 TT genotype showed a reduced risk trend (OR = 0.57, 95% CI = 0.35-0.93, P = 0.024; OR = 0.46, 95% CI = 0.26-0.83, P = 0.010; OR = 0.64, 95% CI = 0.43-0.94, P = 0.022), compared with rs1801274 AG+AA genotypes, rs2736340 CT+TT genotypes or rs4813003 TC+CC genotypes, respectively. Furthermore, a cumulative effect was observed with the ORs being gradually decreased with the increasing accumulative number of non-risk genotypes (Ptrend<0.001). In conclusion, our study suggests that 4 GWAS-identified SNPs, rs2736340, rs4813003, rs3818298 and rs1801274, were nominally associated with KD risk in a Han Chinese population individually and jointly.

Indexed as

Genome-Wide Association StudyAllelesAsian PeopleCase-Control StudiesCD40 AntigensChaperonin Containing TCP-1ChinaFemaleGene FrequencyGenotypeHumansLogistic ModelsMaleMucocutaneous Lymph Node SyndromeOdds RatioPolymorphism, Single NucleotideBLK protein, humanCD40 AntigensChaperonin Containing TCP-1FCGR2A protein, humanReceptors, IgGsrc-Family KinasesTCP1 protein, human

Identifiers

PMID25645453
PMCPMC4314627
OpenAlexW2026419793

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.