Evidence map›Paper›PMID 25644660›Full record

ArticleJournal of molecular biology2015

A Comprehensive Membrane Interactome Mapping of Sho1p Reveals Fps1p as a Novel Key Player in the Regulation of the HOG Pathway in S. cerevisiae.

Mandy Hiu Yi Lam, Jamie Snider, Monique Rehal, Victoria Wong, Farzaneh Aboualizadeh, Luka Drecun, Olivia Wong, Bellal Jubran, Meirui Li, Mehrab Ali and 8 more

Open access · greenAbstract read
In one paragraph

Article in Journal of molecular biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
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  4. Frontiers in microbiology · 2019
    Article
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  8. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 5 institutions in 2 countries.

Mandy Hiu Yi LamDonnelly Centre, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada.
Jamie SniderDonnelly Centre, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada.
Monique RehalDonnelly Centre, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada; Department of Biochemistry, University of Toronto, Medical Science Building, 1 King's College Circle, Toronto, ON M5S 1A8, Canada.
Victoria WongDonnelly Centre, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada.
Farzaneh AboualizadehDonnelly Centre, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada.
Luka DrecunDonnelly Centre, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada.
Olivia WongDonnelly Centre, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada.
Bellal JubranDonnelly Centre, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada.
Meirui LiDonnelly Centre, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada.
Mehrab AliDonnelly Centre, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada.
Matthew JessulatDepartment of Biochemistry, Research and Innovation Centre, University of Regina, 3737 Wascana Parkway, Regina, SK S4S 0A2, Canada.
Viktor DeinekoDepartment of Biochemistry, Research and Innovation Centre, University of Regina, 3737 Wascana Parkway, Regina, SK S4S 0A2, Canada.
Rachel MillerDepartment of Molecular Genetics, The Ohio State University, 318 West 12th Avenue, Columbus, OH 43210, USA.
Mid eum LeeMolecular Cellular Developmental Biology Program, The Ohio State University, 484 West 12th Avenue, Columbus, OH 43210, USA.
Hay-Oak ParkDepartment of Molecular Genetics, The Ohio State University, 318 West 12th Avenue, Columbus, OH 43210, USA; Molecular Cellular Developmental Biology Program, The Ohio State University, 484 West 12th Avenue, Columbus, OH 43210, USA.
Alan DavidsonDepartment of Biochemistry, University of Toronto, Medical Science Building, 1 King's College Circle, Toronto, ON M5S 1A8, Canada; Department of Molecular Genetics, University of Toronto, Medical Sciences Building, 1 King's College Circle, Toronto, ON M5S 1A8, Canada.
Mohan BabuDepartment of Biochemistry, Research and Innovation Centre, University of Regina, 3737 Wascana Parkway, Regina, SK S4S 0A2, Canada.
Igor StagljarDonnelly Centre, University of Toronto, 160 College Street, Toronto, ON M5S 3E1, Canada; Department of Biochemistry, University of Toronto, Medical Science Building, 1 King's College Circle, Toronto, ON M5S 1A8, Canada; Department of Molecular Genetics, University of Toronto, Medical Sciences Building, 1 King's College Circle, Toronto, ON M5S 1A8, Canada. Electronic address: igor.stagljar@utoronto.ca.
University of Toronto · CAThe Ohio State University · USUniversity of Regina · CACanada Research Chairs · CAUniversity of New Brunswick · CA

Funding

Regulation of polarized cell growth by GTPasesR01GM076375 · NIGMS · OHIO STATE UNIVERSITY · PI PARK, HAY-OAK · 2006 to 2009
$1.3M
Canadian Institutes of Health ResearchNIGMS NIH HHS R01 GM076375NIGMS NIH HHS R01-GM76375
6 · The paper itself

Abstract

Sho1p, an integral membrane protein, plays a vital role in the high-osmolarity glycerol (HOG) mitogen-activated protein kinase pathway in the yeast Saccharomyces cerevisiae. Activated under conditions of high osmotic stress, it interacts with other HOG pathway proteins to mediate cell signaling events, ensuring that yeast cells can adapt and remain viable. In an attempt to further understand how the function of Sho1p is regulated through its protein-protein interactions (PPIs), we identified 49 unique Sho1p PPIs through the use of membrane yeast two-hybrid (MYTH), an assay specifically suited to identify PPIs of full-length integral membrane proteins in their native membrane environment. Secondary validation by literature search, or two complementary PPI assays, confirmed 80% of these interactions, resulting in a high-quality Sho1p interactome. This set of putative PPIs included both previously characterized interactors, along with a large subset of interactors that have not been previously identified as binding to Sho1p. The SH3 domain of Sho1p was found to be important for binding to many of these interactors. One particular novel interactor of interest is the glycerol transporter Fps1p, which was shown to require the SH3 domain of Sho1p for binding via its N-terminal soluble regulatory domain. Furthermore, we found that Fps1p is involved in the positive regulation of Sho1p function and plays a role in the phosphorylation of the downstream kinase Hog1p. This study represents the largest membrane interactome analysis of Sho1p to date and complements past studies on the HOG pathway by increasing our understanding of Sho1p regulation.

Indexed as

Cell MembraneGlycerolImmunoprecipitationMembrane ProteinsMitogen-Activated Protein KinasesOsmolar ConcentrationPhosphorylationProtein Interaction MappingSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSignal Transductionsrc Homology DomainsFPS1 protein, S cerevisiaeGlycerolHOG1 protein, S cerevisiaeMembrane ProteinsMitogen-Activated Protein KinasesSaccharomyces cerevisiae ProteinsSHO1 protein, S cerevisiaehigh osmolarity glycerol (HOG) pathwayMAPK pathwaysmembrane yeast two-hybrid assayprotein–protein interactionsSH3 domains

Identifiers

PMID25644660
PMCPMC5331858
OpenAlexW1987766284

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.