ArticleBMC plant biology2015
Construction of a high-density genetic map and QTLs mapping for sugars and acids in grape berries.
Article in BMC plant biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.
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Who cites it
45 citing papers in PubMed.
- Identification of Key Determinants for Perceived Sweetness and Sourness in Fresh Grapes.Food science & nutrition · 2026Article
- Dissecting the genetic basis of relevant fruit quality traits in interspecific grapevines (Horticulture research · 2026Article
- Evaluation and Selection ofPlants (Basel, Switzerland) · 2026Article
- The genetic basis of chloride exclusion in grapevines.G3 (Bethesda, Md.) · 2025Article
- Integrating Dense Genotyping with High-Throughput Phenotyping Empowers the Genetic Dissection of Berry Quality and Resilience Traits in Grapevine.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025Article
- Biography ofHorticulture research · 2024Article
- Basic leucine zipper geneHorticulture research · 2023Article
- Marker-Assisted Selection in Breeding for Fruit Trait Improvement: A Review.International journal of molecular sciences · 2023Review
- Identification of SNP loci and candidate genes genetically controlling norisoprenoids in grape berry based on genome-wide association study.Frontiers in plant science · 2023Article
- Berry Anthocyanin, Acid, and Volatile Trait Analyses in a Grapevine-Interspecific F2 Population Using an Integrated GBS and rhAmpSeq Genetic Map.Plants (Basel, Switzerland) · 2022Article
- Changes and response mechanism of sugar and organic acids in fruits under water deficit stress.PeerJ · 2022Review
- Stable QTL for malate levels in ripe fruit and their transferability acrossHorticulture research · 2022Article
- Germplasm Resources and Strategy for Genetic Breeding ofFrontiers in plant science · 2022Review
- Molecular Tools for Adapting Viticulture to Climate Change.Frontiers in plant science · 2021Review
- Ectopic Expression ofFrontiers in plant science · 2021Article
- Biosynthesis and Cellular Functions of Tartaric Acid in Grapevines.Frontiers in plant science · 2021Review
- Novel stable QTLs identification for berry quality traits based on high-density genetic linkage map construction in table grape.BMC plant biology · 2020Article
- Identification of SNPs and InDels associated with berry size in table grapes integrating genetic and transcriptomic approaches.BMC plant biology · 2020Article
- New quantitative trait locus (QTLs) and candidate genes associated with the grape berry color trait identified based on a high-density genetic map.BMC plant biology · 2020Article
- High-density genetic linkage map construction and cane cold hardiness QTL mapping for Vitis based on restriction site-associated DNA sequencing.BMC genomics · 2020Article
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Authors and funding
6 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundQTLs controlling individual sugars and acids (fructose, glucose, malic acid and tartaric acid) in grape berries have not yet been identified. The present study aimed to construct a high-density, high-quality genetic map of a winemaking grape cross with a complex parentage (V. vinifera × V. amurensis) × ((V. labrusca × V. riparia) × V. vinifera), using next-generation restriction site-associated DNA sequencing, and then to identify loci related to phenotypic variability over three years.
resultsIn total, 1 826 SNP-based markers were developed. Of these, 621 markers were assembled into 19 linkage groups (LGs) for the maternal map, 696 for the paternal map, and 1 254 for the integrated map. Markers showed good linear agreement on most chromosomes between our genetic maps and the previously published V. vinifera reference sequence. However marker order was different in some chromosome regions, indicating both conservation and variation within the genome. Despite the identification of a range of QTLs controlling the traits of interest, these QTLs explained a relatively small percentage of the observed phenotypic variance. Although they exhibited a large degree of instability from year to year, QTLs were identified for all traits but tartaric acid and titratable acidity in the three years of the study; however only the QTLs for malic acid and β ratio (tartaric acid-to-malic acid ratio) were stable in two years. QTLs related to sugars were located within ten LGs (01, 02, 03, 04, 07, 09, 11, 14, 17, 18), and those related to acids within three LGs (06, 13, 18). Overlapping QTLs in LG14 were observed for fructose, glucose and total sugar. Malic acid, total acid and β ratio each had several QTLs in LG18, and malic acid also had a QTL in LG06. A set of 10 genes underlying these QTLs may be involved in determining the malic acid content of berries.
conclusionThe genetic map constructed in this study is potentially a high-density, high-quality map, which could be used for QTL detection, genome comparison, and sequence assembly. It may also serve to broaden our understanding of the grape genome.
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