Evidence map›Paper›PMID 25642769›Full record

ArticleThe Journal of clinical investigation2015

Cytosolic HMGB1 controls the cellular autophagy/apoptosis checkpoint during inflammation.

Xiaorong Zhu, Jeannette S Messer, Yunwei Wang, Fanfei Lin, Candace M Cham, Jonathan Chang, Timothy R Billiar, Michael T Lotze, David L Boone, Eugene B Chang

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of clinical investigation, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 108 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
108citing papers in PubMed, 2 pooled it
13.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

108 citing papers in PubMed, 2 syntheses or guidelines pooled it, 198 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Article
  5. A preliminary study of HMGB1 defense in Crohn's disease.bioRxiv : the preprint server for biology · 2026
    Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. HMGB1: a multifaceted mediator of cell death pathways in cardiovascular diseases.Apoptosis : an international journal on programmed cell death · 2025
    Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Review
  19. Review
  20. Review

48 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Xiaorong Zhu
Jeannette S Messer
Yunwei Wang
Fanfei Lin
Candace M Cham
Jonathan Chang
Timothy R Billiar
Michael T Lotze
David L Boone
Eugene B Chang
University of Chicago · USUniversity of Pittsburgh · USDana-Farber Cancer Institute · US

Funding

ULTRASTRUCTURE AND CYTOMORPHOLOGY COREP30DK042086 · NIDDK · UNIVERSITY OF CHICAGO · PI CHANG, EUGENE B · 1990 to 2025
$29.8M
INTERDISCIPLINARY TRAINING PROGRAM IN IMMUNOLOGYT32AI007090 · NIAID · UNIVERSITY OF CHICAGO · PI Peter Aidan Savage · 1985 to 2026
$11.7M
Mutualistic relationship between Hsp25/27 and gut microbes as a major and essential determinant of mucosal healing and microbial fitness following intestinal injuryR01DK047722 · NIDDK · UNIVERSITY OF CHICAGO · PI CHANG, EUGENE B · 1993 to 2020
$4.3M
Cytoprotective Role of Heat Shock Proteins in IBDR37DK047722 · NIDDK · UNIVERSITY OF CHICAGO · PI CHANG, EUGENE B · 2008 to 2017
$3.8M
Dietary fat effects on gut microbes, host immune state and experimental colitisR01DK097268 · NIDDK · UNIVERSITY OF CHICAGO · PI CHANG, EUGENE B · 2012 to 2016
$2.2M
Functional consequences of autophagy mutations in Crohn's disease.R01AI083375 · NIAID · UNIVERSITY OF CHICAGO · PI BOONE, DAVID L. · 2009 to 2012
$1.3M
IRGM-Mediated Autoplay in Human Intestinal Epithelial CellsF32DK082104 · NIDDK · UNIVERSITY OF CHICAGO · PI MESSER, JEANNETTE SOPHIA · 2009 to 2011
$228k
NIAID NIH HHS AI083375NIAID NIH HHS R01 AI083375NIAID NIH HHS T32 AI007090NIDDK NIH HHS 1F32DK082104NIDDK NIH HHS DK097268NIDDK NIH HHS DK-42086NIDDK NIH HHS DK47722NIDDK NIH HHS F32 DK082104NIDDK NIH HHS P30 DK042086NIDDK NIH HHS P30 DK42086NIDDK NIH HHS R01 DK047722NIDDK NIH HHS R01 DK097268NIDDK NIH HHS R37 DK047722
6 · The paper itself

Abstract

The intracellular protein HMGB1 is released from cells and acts as a damage-associated molecular pattern molecule during many diseases, including inflammatory bowel disease (IBD); however, the intracellular function of HMGB1 during inflammation is poorly understood. Here, we demonstrated that cytosolic HMGB1 regulates apoptosis by protecting the autophagy proteins beclin 1 and ATG5 from calpain-mediated cleavage during inflammation. Colitis in mice with an intestinal epithelial cell-specific Hmgb1 deletion and patients with IBD were both characterized by increased calpain activation, beclin 1 and ATG5 cleavage, and intestinal epithelial cell (IEC) death compared with controls. In vitro cleavage assays and studies of enteroids verified that HMGB1 protects beclin 1 and ATG5 from calpain-mediated cleavage events that generate proapoptotic protein fragments. Together, our results indicate that HMGB1 is essential for mitigating the extent and severity of inflammation-associated cellular injury by controlling the switch between the proautophagic and proapoptotic functions of beclin 1 and ATG5 during inflammation. Moreover, these studies demonstrate that HMGB1 is pivotal for reducing tissue injury in IBD and other complex inflammatory disorders.

Indexed as

ApoptosisAutophagyAdaptive ImmunityAnimalsApoptosis Regulatory ProteinsAutophagy-Related Protein 5Beclin-1CalpainCell Cycle CheckpointsCells, CulturedColitisCytosolDextran SulfateDipeptidesEpithelial CellsFemaleApoptosis Regulatory ProteinsAtg5 protein, mouseAutophagy-Related Protein 5Beclin-1Becn1 protein, mouseCalpaincalpeptinDextran SulfateDipeptidesHMGB1 ProteinHMGB1 protein, mouseMicrotubule-Associated Proteins

Identifiers

PMID25642769
PMCPMC4362239
OpenAlexW1983589036

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.