Evidence map›Paper›PMID 25641932›Full record

Trial reportMolecular nutrition & food research2015

Identification and monitoring of metabolite markers of dry bean consumption in parallel human and mouse studies.

Thushanthi Perera, Matthew R Young, Zhiying Zhang, Gwen Murphy, Nancy H Colburn, Elaine Lanza, Terryl J Hartman, Amanda J Cross, Gerd Bobe

Open access · greenAbstract readRandomized Controlled Trial
In one paragraph

Trial report in Molecular nutrition & food research, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed, 1 pooled it
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 1 synthesis or guideline pooled it, 43 citations in OpenAlex.

  1. Do Common Beans (Nutrients · 2021
    Pooled it
  2. Trial
  3. Trial
  4. Trial
  5. Trial
  6. Trial
  7. Metabolomics Based Biomarkers of Green Beans Intake.Molecular nutrition & food research · 2026
    Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Impact of a short-term Mediterranean diet intervention on plasma metabolites: a pilot study.Metabolomics : Official journal of the Metabolomic Society · 2024
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 2 countries.

Thushanthi PereraLinus Pauling Institute and Department of Animal and Rangeland Sciences, Oregon State University, Corvallis, OR, USA.
Matthew R Young
Zhiying Zhang
Gwen Murphy
Nancy H Colburn
Elaine Lanza
Terryl J Hartman
Amanda J Cross
Gerd Bobe
National Institutes of Health · USOregon State University · USEmory University · USImperial College London · GBNational Cancer Institute · USPennsylvania State University · US

Funding

WRITING AND THE DAILY EXPERIENCE OF ILLNESSM01RR010732 · NCRR · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI LOHSE, BARBARA · 1995 to 2009
$29.8M
The Role of AP-1 and Other Transcription Factors in Cancer Cause and PreventionZIABC010025 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI COLBURN, NANCY H. · 2009 to 2013
$2.7M
Lower Gastrointestinal Cancer StudiesZ01CP010198 · NCI · DIVISION OF CANCER EPIDEMIOLOGY AND GENETICS · PI SCHATZKIN, ARTHUR · 2007 to 2008
$1.4M
Intramural NIH HHS Z01 CP010198Intramural NIH HHS ZIA BC010025NCI NIH HHS Z01 CP10198-08NCRR NIH HHS M01 RR010732NCRR NIH HHS M01 RR10732
6 · The paper itself

Abstract

scopeAim of the study was to identify and monitor metabolite markers of dry bean consumption in parallel human and mouse studies that each had shown chemopreventive effects of dry bean consumption on colorectal neoplasia risk. METHODS AND

resultsUsing LC/mass spectroscopy ± ESI and GC/mass spectroscopy, serum metabolites of dry beans were measured in 46 men before and after a 4-week dry bean enriched diet (250 g/day) and 12 mice that received a standardized diet containing either 0 or 10% navy bean ethanol extract for 6 weeks; we also investigated fecal metabolites in the mice. The serum metabolites identified in these controlled feeding studies were then investigated in 212 polyp-free participants from the Polyp Prevention Trial who self-reported either increased (≥+31 g/day from baseline), high dry bean intake of ≥42 g/day in year 3 or low, unchanged dry bean consumption of <8 g/day; serum was analyzed from baseline and year 3. Serum pipecolic acid and S-methyl cysteine were elevated after dry bean consumption in human and mouse studies and reflected dry bean consumption in the Polyp Prevention Trial.

conclusionSerum levels of pipecolic acid and S-methyl cysteine are useful biomarkers of dry bean consumption.

Indexed as

DietFabaceaeAdultAgedAnimalsAnticarcinogenic AgentsBiomarkersChromatography, LiquidColorectal NeoplasmsCross-Over StudiesCysteineFecesGastrointestinal MicrobiomeHumansIntestinal MucosaIntestinesAnticarcinogenic AgentsBiomarkersCysteinemecysteinepipecolic acidPipecolic AcidsPlant ExtractsBiomarkersDry bean consumptionMetabolomicsPipecolic acidS-methyl cysteine

Identifiers

PMID25641932
PMCPMC4417744
OpenAlexW2046513039

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.