Evidence map›Paper›PMID 25635869›Full record

ArticleNature communications2015

Hydrophobic mismatch sorts SNARE proteins into distinct membrane domains.

Dragomir Milovanovic, Alf Honigmann, Seiichi Koike, Fabian Göttfert, Gesa Pähler, Meike Junius, Stefan Müllar, Ulf Diederichsen, Andreas Janshoff, Helmut Grubmüller and 5 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 81 papers.

0numbers the graph read from it
0cells of the map it votes in
81citing papers in PubMed
9.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

81 citing papers in PubMed, 164 citations in OpenAlex.

  1. Article
  2. Hydrophobic mismatch induces lipid sorting based on tail unsaturation.bioRxiv : the preprint server for biology · 2026
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21 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 4 countries.

Dragomir MilovanovicDepartment of Neurobiology, Max Planck Institute for Biophysical Chemistry, D-37077 Göttingen, Germany.
Alf HonigmannDepartment of NanoBiophotonics, Max Planck Institute for Biophysical Chemistry, D-37077 Göttingen, Germany.
Seiichi KoikeDepartment of Neurobiology, Max Planck Institute for Biophysical Chemistry, D-37077 Göttingen, Germany.
Fabian GöttfertDepartment of NanoBiophotonics, Max Planck Institute for Biophysical Chemistry, D-37077 Göttingen, Germany.
Gesa PählerInstitute for Physical Chemistry, Georg-August-University, Göttingen D-37077, Germany.
Meike JuniusInstitute for Organic and Biomolecular Chemistry, Georg-August-University, Göttingen D-37077, Germany.
Stefan MüllarInstitute for Organic and Biomolecular Chemistry, Georg-August-University, Göttingen D-37077, Germany.
Ulf DiederichsenInstitute for Organic and Biomolecular Chemistry, Georg-August-University, Göttingen D-37077, Germany.
Andreas JanshoffInstitute for Physical Chemistry, Georg-August-University, Göttingen D-37077, Germany.
Helmut GrubmüllerDepartment of Theoretical and Computational Biophysics, Max Planck Institute for Biophysical Chemistry, D-37077 Göttingen, Germany.
Herre J Risselada1] Department of Theoretical and Computational Biophysics, Max Planck Institute for Biophysical Chemistry, D-37077 Göttingen, Germany [2] Department of Chemistry, Leibnitz Institute of Surface Modification, D-04318 Leipzig, Germany.
Christian Eggeling1] Department of NanoBiophotonics, Max Planck Institute for Biophysical Chemistry, D-37077 Göttingen, Germany [2] MRC Human Immunology Unit, Weatherall Institute of Molecular Medicine, University of Oxford, Oxford OX3 9DS, UK.
Stefan W HellDepartment of NanoBiophotonics, Max Planck Institute for Biophysical Chemistry, D-37077 Göttingen, Germany.
Geert van den Bogaart1] Department of Neurobiology, Max Planck Institute for Biophysical Chemistry, D-37077 Göttingen, Germany [2] Department of Tumor Immunology, Radboud University Medical Center, 6525 GA Nijmegen, The Netherlands.
Reinhard JahnDepartment of Neurobiology, Max Planck Institute for Biophysical Chemistry, D-37077 Göttingen, Germany.
Max Planck Institute for Biophysical Chemistry · DEUniversity of Göttingen · DEUniversity Medical Center · USUniversity of Oxford · GB

Funding

Structural Dynamics of the Exocytotic Fusion Machine in Neurons.P01GM072694 · NIGMS · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI TAMM, LUKAS K · 2005 to 2021
$17.4M
European Research Council 336479Medical Research Council MC_UU_12010/9Medical Research Council MR/K01577X/1NIGMS NIH HHS P01 GM072694
6 · The paper itself

Abstract

The clustering of proteins and lipids in distinct microdomains is emerging as an important principle for the spatial patterning of biological membranes. Such domain formation can be the result of hydrophobic and ionic interactions with membrane lipids as well as of specific protein-protein interactions. Here using plasma membrane-resident SNARE proteins as model, we show that hydrophobic mismatch between the length of transmembrane domains (TMDs) and the thickness of the lipid membrane suffices to induce clustering of proteins. Even when the TMDs differ in length by only a single residue, hydrophobic mismatch can segregate structurally closely homologous membrane proteins in distinct membrane domains. Domain formation is further fine-tuned by interactions with polyanionic phosphoinositides and homo and heterotypic protein interactions. Our findings demonstrate that hydrophobic mismatch contributes to the structural organization of membranes.

Indexed as

AnimalsFluorescence Resonance Energy TransferFluorescent Antibody TechniqueHumansHydrophobic and Hydrophilic InteractionsMolecular Dynamics SimulationPhosphatidylinositolsProtein BindingProtein Structure, TertiaryRatsSNARE ProteinsPhosphatidylinositolsSNARE Proteins

Identifiers

PMID25635869
PMCPMC4313621
OpenAlexW2121947019

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.