Evidence map›Paper›PMID 25635057›Full record

ArticleThe Journal of biological chemistry2015

Quantitative analysis of receptor tyrosine kinase-effector coupling at functionally relevant stimulus levels.

Simin Li, Devayani Bhave, Jennifer M Chow, Thomas V Riera, Sandra Schlee, Simone Rauch, Mariya Atanasova, Richard L Cate, Adrian Whitty

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.1field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Simin LiFrom the Department of Chemistry, Boston University, Boston, Massachusetts 02215.
Devayani BhaveFrom the Department of Chemistry, Boston University, Boston, Massachusetts 02215.
Jennifer M ChowFrom the Department of Chemistry, Boston University, Boston, Massachusetts 02215.
Thomas V RieraFrom the Department of Chemistry, Boston University, Boston, Massachusetts 02215.
Sandra SchleeFrom the Department of Chemistry, Boston University, Boston, Massachusetts 02215.
Simone RauchFrom the Department of Chemistry, Boston University, Boston, Massachusetts 02215.
Mariya AtanasovaFrom the Department of Chemistry, Boston University, Boston, Massachusetts 02215.
Richard L CateFrom the Department of Chemistry, Boston University, Boston, Massachusetts 02215.
Adrian WhittyFrom the Department of Chemistry, Boston University, Boston, Massachusetts 02215 whitty@bu.edu.
Boston University · US

Funding

Quantitative Analysis of RET Receptor Activation and SignalingR01GM087469 · NIGMS · BOSTON UNIVERSITY (CHARLES RIVER CAMPUS) · PI WHITTY, ADRIAN · 2010 to 2013
$1.2M
Activation and Signaling Mechanism of the RET Tyrosine Kinase ReceptorF31CA177224 · NCI · BOSTON UNIVERSITY (CHARLES RIVER CAMPUS) · PI CHOW, JENNIFER MARIE · 2013 to 2016
$135k
NCI NIH HHS F31 CA177224NIGMS NIH HHS GM087469NIGMS NIH HHS R01 GM087469
6 · The paper itself

Abstract

A major goal of current signaling research is to develop a quantitative understanding of how receptor activation is coupled to downstream signaling events and to functional cellular responses. Here, we measure how activation of the RET receptor tyrosine kinase on mouse neuroblastoma cells by the neurotrophin artemin (ART) is quantitatively coupled to key downstream effectors. We show that the efficiency of RET coupling to ERK and Akt depends strongly on ART concentration, and it is highest at the low (∼100 pM) ART levels required for neurite outgrowth. Quantitative discrimination between ERK and Akt pathway signaling similarly is highest at this low ART concentration. Stimulation of the cells with 100 pM ART activated RET at the rate of ∼10 molecules/cell/min, leading at 5-10 min to a transient peak of ∼150 phospho-ERK (pERK) molecules and ∼50 pAkt molecules per pRET, after which time the levels of these two signaling effectors fell by 25-50% while the pRET levels continued to slowly rise. Kinetic experiments showed that signaling effectors in different pathways respond to RET activation with different lag times, such that the balance of signal flux among the different pathways evolves over time. Our results illustrate that measurements using high, super-physiological growth factor levels can be misleading about quantitative features of receptor signaling. We propose a quantitative model describing how receptor-effector coupling efficiency links signal amplification to signal sensitization between receptor and effector, thereby providing insight into design principles underlying how receptors and their associated signaling machinery decode an extracellular signal to trigger a functional cellular outcome.

Indexed as

AnimalsCell Line, TumorDose-Response Relationship, DrugGene Expression RegulationKineticsLigandsMiceMitogen-Activated Protein Kinase 1Mitogen-Activated Protein Kinase 3Nerve Tissue ProteinsNeuronsPhosphoproteinsPhosphorylationProto-Oncogene Proteins c-aktProto-Oncogene Proteins c-retSignal TransductionArtn protein, mouseLigandsMitogen-Activated Protein Kinase 1Mitogen-Activated Protein Kinase 3Nerve Tissue ProteinsPhosphoproteinsProto-Oncogene Proteins c-aktProto-Oncogene Proteins c-retRet protein, mouseAkt PKBArteminExtracellular Signal-regulated Kinase (ERK)KineticsMitogen-activated Protein Kinase (MAPK)Neurite OutgrowthRETSignal GainSignal TransductionSystems Biology

Identifiers

PMID25635057
PMCPMC4400318
OpenAlexW1964040053

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.