Evidence map›Paper›PMID 25633353›Full record

ArticleDevelopment (Cambridge, England)2015

Auxin-induced degradation dynamics set the pace for lateral root development.

Jessica M Guseman, Antje Hellmuth, Amy Lanctot, Tamar P Feldman, Britney L Moss, Eric Klavins, Luz Irina A Calderón Villalobos, Jennifer L Nemhauser

Open access · bronzeAbstract read
In one paragraph

Article in Development (Cambridge, England), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
17.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 82 citations in OpenAlex.

  1. Article
  2. Review
  3. Genome-Wide Identification of the ARF Gene Family in Safflower (International journal of molecular sciences · 2025
    Article
  4. Article
  5. Article
  6. Nitrate Starvation Induces Lateral Root Organogenesis inInternational journal of molecular sciences · 2024
    Article
  7. Article
  8. Article
  9. Genome-Wide Identification and Analysis of the Aux/IAA Gene Family inInternational journal of molecular sciences · 2024
    Article
  10. Article
  11. A non-canonicalFrontiers in plant science · 2024
    Article
  12. Article
  13. Intrinsic disorder and conformational coexistence in auxin coreceptors.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  14. Article
  15. Article
  16. The Systems and Synthetic Biology of Auxin.Cold Spring Harbor perspectives in biology · 2022
    Review
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Jessica M GusemanDepartment of Biology, University of Washington, Seattle, WA 98195, USA.
Antje HellmuthLeibniz Institute of Plant Biochemistry, Halle (Saale) 06120, Germany.
Amy LanctotDepartment of Biology, University of Washington, Seattle, WA 98195, USA.
Tamar P FeldmanDepartment of Biology, University of Washington, Seattle, WA 98195, USA.
Britney L MossDepartment of Biology, University of Washington, Seattle, WA 98195, USA.
Eric KlavinsDepartment of Electrical Engineering, University of Washington, Seattle, WA 98195, USA.
Luz Irina A Calderón VillalobosLeibniz Institute of Plant Biochemistry, Halle (Saale) 06120, Germany.
Jennifer L NemhauserDepartment of Biology, University of Washington, Seattle, WA 98195, USA jn7@uw.edu.
University of Washington · USLeibniz Institute of Plant Biochemistry · DE

Funding

INTERDISCIPLINARY TRAINING IN DEVELOPMENTAL BIOLOGYT32HD007183 · NICHD · UNIVERSITY OF WASHINGTON · PI RAIBLE, DAVID W · 1985 to 2015
$5.7M
Control of protein degradation dynamics in the auxin responseR01GM107084 · NIGMS · UNIVERSITY OF WASHINGTON · PI NEMHAUSER, JENNIFER L · 2014 to 2022
$2.4M
Determinants of Protein Degradation Dynamics in Cell SignalingF32CA180514 · NCI · UNIVERSITY OF WASHINGTON · PI MOSS, BRITNEY LANE · 2013 to 2015
$111k
NCI NIH HHS F32 CA180514NICHD NIH HHS T32 HD007183NICHD NIH HHS T32HD007183NIGMS NIH HHS R01 GM107084
6 · The paper itself

Abstract

Auxin elicits diverse cell behaviors through a simple nuclear signaling pathway initiated by degradation of Aux/IAA co-repressors. Our previous work revealed that members of the large Arabidopsis Aux/IAA family exhibit a range of degradation rates in synthetic contexts. However, it remained an unresolved issue whether differences in Aux/IAA turnover rates played a significant role in plant responses to auxin. Here, we use the well-established model of lateral root development to directly test the hypothesis that the rate of auxin-induced Aux/IAA turnover sets the pace for auxin-regulated developmental events. We did this by generating transgenic plants expressing degradation rate variants of IAA14, a crucial determinant of lateral root initiation. Progression through the well-established stages of lateral root development was strongly correlated with the engineered rates of IAA14 turnover, leading to the conclusion that Aux/IAAs are auxin-initiated timers that synchronize developmental transitions.

Indexed as

ArabidopsisArabidopsis ProteinsGene Expression Regulation, PlantIndoleacetic AcidsPlant Growth RegulatorsPlant RootsSaccharomyces cerevisiaeArabidopsis ProteinsIndoleacetic AcidsPlant Growth RegulatorsArabidopsisPhytohormoneSaccharomycesUbiquitin

Identifiers

PMID25633353
PMCPMC4352979
OpenAlexW2109197653

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.