ArticleMolecules (Basel, Switzerland)2015
Development and validation of 697 novel polymorphic genomic and EST-SSR markers in the American cranberry (Vaccinium macrocarpon Ait.).
Article in Molecules (Basel, Switzerland), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.
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Who cites it
18 citing papers in PubMed.
- Genetic Diversity and Identification ofPlants (Basel, Switzerland) · 2024Article
- Intersectional Hybrids between Darrow's Blueberry (Plants (Basel, Switzerland) · 2024Article
- Development of genome-specific SSR markers for the identification of introgressed segments of3 Biotech · 2022Article
- The New Cranberry Wisconsin Research Station: Renovation Priorities of a 'Stevens' Cranberry Marsh Based on Visual Mapping, Genetic Testing, and Yield Data.International journal of fruit science · 2022Article
- Development of Novel Polymorphic EST-SSR Markers from the Cranberry Fruit Transcriptome.Iranian journal of biotechnology · 2021Article
- The Genetic Diversity of Cranberry Crop Wild Relatives,Plants (Basel, Switzerland) · 2020Article
- Genotyping-by-Sequencing Identifies Historical Breeding Stages of the Recently Domesticated American Cranberry.Frontiers in plant science · 2020Article
- Article
- Transcriptome sequencing of Himalayan Raspberry (3 Biotech · 2019Article
- Genetic diversity and cultivar variants in the NCGR cranberry (Journal of genetics · 2018Article
- Development of Sparganothis sulfureana (Lepidoptera: Tortricidae) on Cranberry Cultivars.Insects · 2018Article
- Image-based phenotyping for identification of QTL determining fruit shape and size in American cranberry (PeerJ · 2018Article
- Construction of a High-Density American Cranberry (G3 (Bethesda, Md.) · 2017Article
- Exploiting genotyping by sequencing to characterize the genomic structure of the American cranberry through high-density linkage mapping.BMC genomics · 2016Article
- Characterization of Novel Microsatellite Loci for Primula poissonii (Primulaceae) Using High-Throughput Sequencing Technology.Molecules (Basel, Switzerland) · 2016Article
- Article
- De novo assembly and characterization of the leaf, bud, and fruit transcriptome from the vulnerable tree Juglans mandshurica for the development of 20 new microsatellite markers using Illumina sequencing.Molecular genetics and genomics : MGG · 2016Article
- Informativeness of minisatellite and microsatellite markers for genetic analysis in papaya.Genetica · 2015Article
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8 authors.
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No grant is acknowledged in the PubMed record.
Abstract
The American cranberry, Vaccinium macrocarpon Ait., is an economically important North American fruit crop that is consumed because of its unique flavor and potential health benefits. However, a lack of abundant, genome-wide molecular markers has limited the adoption of modern molecular assisted selection approaches in cranberry breeding programs. To increase the number of available markers in the species, this study identified, tested, and validated microsatellite markers from existing nuclear and transcriptome sequencing data. In total, new primers were designed, synthesized, and tested for 979 SSR loci; 697 of the markers amplified allele patterns consistent with single locus segregation in a diploid organism and were considered polymorphic. Of the 697 polymorphic loci, 507 were selected for additional genetic diversity and segregation analyses in 29 cranberry genotypes. More than 95% of the 507 loci did not display segregation distortion at the p < 0.05 level, and contained moderate to high levels of polymorphism with a polymorphic information content >0.25. This comprehensive collection of developed and validated microsatellite loci represents a substantial addition to the molecular tools available for geneticists, genomicists, and breeders in cranberry and Vaccinium.
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